Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22580 and AO356_22585 are separated by 149 nucleotidesAO356_22585 and AO356_22590 are separated by 54 nucleotidesAO356_22590 and AO356_22595 are separated by 128 nucleotidesAO356_22595 and AO356_22600 are separated by 1470 nucleotides AO356_22580: AO356_22580 - cytochrome C, at 5,046,620 to 5,047,000 _22580 AO356_22585: AO356_22585 - MerR family transcriptional regulator, at 5,047,150 to 5,047,650 _22585 AO356_22590: AO356_22590 - 2,4-dienoyl-CoA reductase, at 5,047,705 to 5,048,937 _22590 AO356_22595: AO356_22595 - regulation of enolase 1, at 5,049,066 to 5,049,650 _22595 AO356_22600: AO356_22600 - LysR family transcriptional regulator, at 5,051,121 to 5,051,987 _22600
Group Condition AO356_22580 AO356_22585 AO356_22590 AO356_22595 AO356_22600
survival 4C survival; 360 hrs -0.1 -3.1 -0.5 -0.0 +0.1
motility outer cut, LB soft agar motility assay +0.2 -2.1 +0.3 -0.4 +0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.4 -1.3 +0.1 -0.1 -0.1
stress 1-ethyl-3-methylimidazolium acetate 5 mM +0.3 -1.3 -0.3 -0.4 +0.3
stress Sisomicin 0.001 mg/ml +0.2 -1.1 -0.1 +0.1 -0.3
stress nitrite 10 mM +0.0 -1.0 +0.4 -0.4 -0.2
stress Chlorite 0.04 mM +0.0 -1.1 +0.3 +0.1 -0.3
stress Cholin acetate 20 mM +0.3 -1.4 -0.0 +0.2 +0.1
nitrogen source Uridine (N) +0.2 +0.4 -0.5 -0.3 -0.2
stress Lomefloxacin 0.0005 mM +0.4 -0.4 -0.3 -0.4 +0.2
carbon source Carbon source D-Mannitol 5 mM +0.1 +0.5 -0.7 +0.3 -0.4
carbon source L-Aspartic Acid (C) +0.3 -0.6 +0.2 +0.3 -0.1
carbon source L-Lysine (C) +0.2 -0.9 +0.3 +0.5 -0.0
carbon source Carbon source D-Mannitol 10 mM -0.2 +0.5 -0.3 +0.3 -0.2
carbon source Carbon source D-Mannitol 2.5 mM +0.2 +1.1 -0.2 -0.2 -0.7
carbon source Carbon source D,L-Lactate 10 mM +0.5 +0.4 -0.6 -0.0 +0.0
carbon source Inosine (C) -0.3 +0.8 +0.0 -0.5 +0.2
stress Thallium(I) acetate 0.008 mg/ml +0.2 +0.4 -0.5 +0.2 -0.1
survival 4C survival; 192 hrs -0.0 +0.6 -0.6 +0.2 +0.2
carbon source L-Proline (C) +0.5 -0.1 -0.2 +0.5 -0.2
carbon source Carbon source Sucrose 5 mM +0.3 +0.9 -0.1 -0.0 -0.6
nitrogen source Urea (N) +0.1 +0.2 +0.8 -0.2 -0.1
anaerobic Nitrate reduction with yeast extract +0.7 +0.3 -0.6 +0.2 +0.2
carbon source Carbon source D-Mannitol 10 mM -0.0 +0.9 -0.1 +0.3 -0.1
stress methylglyoxal 0.016 vol% -0.1 +1.1 -0.1 +0.2 -0.0
motility outer cut, LB soft agar motility assay +0.1 +1.1 +0.3 +0.0 -0.3
nitrogen source L-Isoleucine (N) -0.1 +0.7 +0.5 +0.0 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.4 +1.9 +0.5 -0.1 +0.3
stress KB-half, Pseudo5 supernatant -0.3 +1.8 +0.3 +0.0 +0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.3 +1.3 +0.2 +0.7 +0.3
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