Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22545 and AO356_22550 are separated by 19 nucleotidesAO356_22550 and AO356_22555 are separated by 274 nucleotidesAO356_22555 and AO356_22560 are separated by 2517 nucleotidesAO356_22560 and AO356_22565 are separated by 502 nucleotides AO356_22545: AO356_22545 - LysR family transcriptional regulator, at 5,038,179 to 5,039,117 _22545 AO356_22550: AO356_22550 - hypothetical protein, at 5,039,137 to 5,039,598 _22550 AO356_22555: AO356_22555 - chloroperoxidase, at 5,039,873 to 5,040,559 _22555 AO356_22560: AO356_22560 - hypothetical protein, at 5,043,077 to 5,043,727 _22560 AO356_22565: AO356_22565 - hypothetical protein, at 5,044,230 to 5,044,502 _22565
Group Condition AO356_22545 AO356_22550 AO356_22555 AO356_22560 AO356_22565
anaerobic Nitrate reduction with yeast extract -0.2 -0.3 -0.2 -0.1 -1.0
stress Doxycycline hyclate 0.0001 mg/ml -0.1 +0.0 +0.2 -0.3 -1.0
carbon source D-Sorbitol (C) +0.1 -0.2 -0.1 -0.0 -1.0
temperature LB 10C -0.0 -0.2 -0.1 -0.1 -0.7
stress Choline chloride 500 mM -0.2 +0.0 +0.2 -0.0 -1.1
survival 4C survival; 24 hrs -0.2 -0.1 -0.1 +0.0 -0.7
stress Chloramphenicol 0.005 mg/ml -0.0 -0.1 +0.1 -0.1 -0.9
temperature LB 37C -0.1 -0.1 -0.1 -0.1 -0.7
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.2 -0.0 -0.1 -0.0 -0.9
stress methylglyoxal 0.016 vol% -0.1 +0.0 +0.1 -0.0 -0.9
pH Minimal media pH8 +0.0 -0.1 +0.0 +0.0 -0.9
survival 4C survival; 672 hrs -0.1 -0.1 -0.2 +0.1 -0.6
carbon source Carbon source D-Mannitol 2.5 mM -0.1 +0.1 +0.0 +0.0 -0.9
pH Minimal media pH6 -0.1 -0.1 +0.0 +0.1 -0.7
stress D-Cycloserine 0.1 mg/ml +0.0 -0.1 +0.1 +0.0 -0.9
nitrogen source L-tyrosine (N) -0.1 -0.1 +0.1 +0.0 -0.6
survival 4C survival; 360 hrs -0.1 +0.1 +0.1 +0.1 -0.9
stress Chlorite 0.08 mM +0.3 -0.2 -0.0 +0.0 -0.7
stress Bacitracin 2 mg/ml +0.1 +0.2 +0.1 +0.0 -0.9
stress Choline chloride 300 mM +0.0 +0.1 +0.2 +0.1 -0.9
stress Cobalt chloride 0.08 mM -0.0 -0.1 -0.0 +0.3 -0.5
lb LB -0.0 +0.1 +0.2 +0.1 -0.7
carbon source D-Glucosamine Hydrochloride (C) +0.0 -0.2 -0.2 -0.1 +0.7
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 +0.2 +0.2 +0.2 -0.3
nitrogen source D-Serine (N) -0.3 +0.0 +0.0 +0.0 +0.6
carbon source L-Alanine (C) -0.1 +0.1 -0.1 +0.1 +0.9
carbon source Carbon source Sucrose 2.5 mM -0.1 +0.2 -0.0 +0.0 +0.8
stress Paraquat dichloride 0.0625 mg/ml +0.0 -0.0 +0.1 -0.1 +0.8
motility outer cut, LB soft agar motility assay +0.4 -0.1 +0.0 +0.2 +0.7
motility outer cut, LB soft agar motility assay -0.1 -0.2 -0.0 +0.3 +1.5
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