Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22480 and AO356_22485 are separated by 63 nucleotidesAO356_22485 and AO356_22490 are separated by 86 nucleotidesAO356_22490 and AO356_22495 are separated by 181 nucleotidesAO356_22495 and AO356_22500 overlap by 4 nucleotides AO356_22480: AO356_22480 - oxidoreductase, at 5,023,651 to 5,025,216 _22480 AO356_22485: AO356_22485 - hypothetical protein, at 5,025,280 to 5,026,053 _22485 AO356_22490: AO356_22490 - phosphohydrolase, at 5,026,140 to 5,027,579 _22490 AO356_22495: AO356_22495 - RNA polymerase subunit sigma-24, at 5,027,761 to 5,028,267 _22495 AO356_22500: AO356_22500 - hypothetical protein, at 5,028,264 to 5,029,190 _22500
Group Condition AO356_22480 AO356_22485 AO356_22490 AO356_22495 AO356_22500
carbon source L-Arginine (C) -0.1 +0.1 -0.3 -0.2 -0.5
stress acetate 40 mM +0.0 -0.3 -0.1 -0.2 -0.3
stress Ceftazidime 0.2 mg/ml -0.4 -0.3 -0.2 -0.1 +0.1
carbon source acetate (C) -0.3 +0.2 -0.4 -0.1 -0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.0 -0.5 -0.0 +0.2 -0.4
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.0 +0.1 -0.3 -0.2 -0.3
stress Paraquat dichloride 0.0625 mg/ml -0.3 -0.2 +0.1 -0.2 -0.1
stress Thallium(I) acetate 0.008 mg/ml -0.2 +0.2 -0.2 -0.2 -0.2
nitrogen source Ammonium chloride (N) +0.1 +0.1 -0.0 -0.4 -0.4
carbon source D,L-Lactate (C) +0.0 +0.2 -0.2 -0.2 -0.3
nitrogen source Adenine (N) -0.2 -0.6 +0.2 +0.0 +0.0
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.2 -0.2 -0.2 +0.1 -0.3
carbon source Carbon source D-Mannitol 10 mM -0.1 -0.2 +0.2 +0.3 -0.5
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.3 +0.1 +0.1 -0.2 -0.2
pH Minimal media pH9 +0.0 -0.4 -0.2 +0.0 +0.3
stress nitrate 200 mM +0.1 +0.6 +0.1 -0.5 -0.5
stress copper (II) chloride 2.5 mM +0.2 +0.2 +0.4 -0.5 -0.5
motility outer cut, LB soft agar motility assay -0.2 -0.3 +0.0 +0.3 -0.1
survival 4C survival; 192 hrs -0.2 -0.1 -0.1 -0.1 +0.3
carbon source Carbon source D-Mannitol 5 mM -0.0 -0.5 +0.3 +0.2 -0.2
anaerobic Nitrate reduction with yeast extract +0.3 -0.5 +0.1 +0.2 -0.0
carbon source Carbon source D-Mannitol 2.5 mM -0.2 -0.3 +0.2 +0.4 +0.1
stress Cobalt chloride 0.08 mM -0.1 +0.6 +0.0 -0.1 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 -0.3 -0.2 +0.4 +0.4
stress Chlorite 0.08 mM -0.3 +0.2 -0.1 +0.1 +0.4
carbon source D-Gluconic Acid (C) +0.0 +0.4 -0.3 +0.1 +0.1
carbon source D-Lactate (C) -0.0 +0.6 -0.2 +0.1 -0.1
survival 4C survival; 1152 hrs +0.2 +0.2 -0.1 +0.0 +0.5
motility outer cut, LB soft agar motility assay -0.1 +0.6 +0.6 +0.1 +0.1
stress KB-half, Pseudo5 supernatant +0.2 -0.2 -0.3 +0.9 +0.8
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