Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22285 and AO356_22290 are separated by 167 nucleotidesAO356_22290 and AO356_22295 overlap by 4 nucleotidesAO356_22295 and AO356_22300 are separated by 196 nucleotidesAO356_22300 and AO356_22305 are separated by 18 nucleotides AO356_22285: AO356_22285 - LacI family transcriptional regulator, at 4,983,916 to 4,984,920 _22285 AO356_22290: AO356_22290 - oxidoreductase, at 4,985,088 to 4,986,263 _22290 AO356_22295: AO356_22295 - AP endonuclease, at 4,986,260 to 4,987,339 _22295 AO356_22300: AO356_22300 - MFS transporter, at 4,987,536 to 4,988,768 _22300 AO356_22305: AO356_22305 - alginate lyase, at 4,988,787 to 4,989,443 _22305
Group Condition AO356_22285 AO356_22290 AO356_22295 AO356_22300 AO356_22305
stress copper (II) chloride 2.5 mM N.D. -0.7 -0.1 +0.0 +0.0
carbon source Carbon source D-Mannitol 5 mM N.D. -0.5 -0.1 +0.1 -0.1
carbon source Carbon source D,L-Lactate 10 mM N.D. -0.3 +0.1 -0.1 -0.2
motility outer cut, LB soft agar motility assay N.D. -0.3 +0.0 -0.4 +0.1
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine N.D. -0.3 -0.2 +0.1 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. -0.9 +0.3 -0.1 +0.1
carbon source L-Histidine (C) N.D. -0.2 -0.2 -0.2 +0.2
carbon source L-Arabinose (C) N.D. -0.6 +0.2 -0.2 +0.3
anaerobic Nitrate reduction with yeast extract N.D. -0.1 -0.5 +0.3 -0.0
carbon source Carbon source D-Glucose 10 mM N.D. -0.5 +0.2 +0.1 +0.0
stress Choline chloride 500 mM N.D. +0.1 -0.2 -0.2 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. -0.4 -0.1 +0.1 +0.3
stress methylglyoxal 0.016 vol% N.D. +0.3 -0.3 -0.1 +0.1
carbon source D-Sorbitol (C) N.D. +0.3 -0.2 +0.1 +0.2
stress Cephalothin 2 mg/ml N.D. +0.7 -0.3 -0.1 +0.0
pH Minimal media pH8 N.D. +0.4 -0.2 +0.1 +0.1
stress Cholin acetate 40 mM N.D. +0.6 +0.2 -0.2 -0.1
stress Chlorite 0.04 mM N.D. +0.4 -0.1 +0.3 -0.1
stress Cobalt chloride 0.08 mM N.D. +0.5 -0.1 -0.0 +0.2
survival 4C survival; 672 hrs N.D. +0.3 -0.1 +0.2 +0.1
carbon source acetate (C) N.D. +0.2 +0.3 -0.1 +0.2
stress Cisplatin 0.0032 mg/ml N.D. +0.2 +0.2 +0.1 +0.2
survival 4C survival; 1152 hrs N.D. +0.3 +0.2 +0.0 +0.1
nitrogen source Gly-Glu (N) N.D. +0.3 +0.1 +0.1 +0.2
stress 1-ethyl-3-methylimidazolium lysine 10 mM N.D. +0.5 +0.1 -0.0 +0.1
stress KB-half, Pseudo5 supernatant N.D. +0.8 -0.0 -0.2 +0.2
stress Spectinomycin 0.025 mg/ml N.D. +0.5 +0.1 +0.1 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. +1.4 -0.2 -0.3 -0.1
carbon source L-Arginine (C) N.D. +0.5 +0.1 +0.1 +0.2
stress Benzalkonium Chloride 0.016 mg/ml N.D. +0.4 +0.2 +0.1 +0.3
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