Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22175 and AO356_22180 are separated by 58 nucleotidesAO356_22180 and AO356_22185 are separated by 214 nucleotidesAO356_22185 and AO356_22190 overlap by 4 nucleotidesAO356_22190 and AO356_22195 are separated by 15 nucleotides AO356_22175: AO356_22175 - cell division protein FtsK, at 4,963,107 to 4,965,512 _22175 AO356_22180: AO356_22180 - outer membrane lipoprotein carrier protein LolA, at 4,965,571 to 4,966,194 _22180 AO356_22185: AO356_22185 - recombination factor protein RarA, at 4,966,409 to 4,967,734 _22185 AO356_22190: AO356_22190 - camphor resistance protein CrcB, at 4,967,731 to 4,968,105 _22190 AO356_22195: AO356_22195 - serine--tRNA ligase, at 4,968,121 to 4,969,401 _22195
Group Condition AO356_22175 AO356_22180 AO356_22185 AO356_22190 AO356_22195
stress methylglyoxal 0.016 vol% N.D. N.D. -5.7 +0.1 N.D.
stress sodium fluoride 6.25 mM N.D. N.D. -1.5 -3.6 N.D.
carbon source L-Arginine (C) N.D. N.D. -0.2 -0.7 N.D.
motility outer cut, LB soft agar motility assay N.D. N.D. -0.2 -0.7 N.D.
temperature LB 37C N.D. N.D. -0.6 -0.2 N.D.
lb LB N.D. N.D. -0.3 -0.4 N.D.
survival 4C survival; 1152 hrs N.D. N.D. -0.2 -0.6 N.D.
stress Choline chloride 300 mM N.D. N.D. -0.5 -0.1 N.D.
motility outer cut, LB soft agar motility assay N.D. N.D. -0.1 -0.6 N.D.
survival 4C survival; 24 hrs N.D. N.D. -0.3 -0.3 N.D.
motility outer cut, LB soft agar motility assay N.D. N.D. -0.5 -0.1 N.D.
carbon source Inosine (C) N.D. N.D. -0.1 -0.5 N.D.
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. N.D. -0.6 +0.1 N.D.
stress Nickel (II) chloride 0.625 mM N.D. N.D. +0.3 -0.6 N.D.
carbon source Ethanol (C) N.D. N.D. +0.2 -0.5 N.D.
carbon source L-Histidine (C) N.D. N.D. +0.3 -0.6 N.D.
carbon source L-Isoleucine (C) N.D. N.D. +0.2 -0.5 N.D.
carbon source D-Ribose (C) N.D. N.D. +0.2 -0.4 N.D.
stress Thallium(I) acetate 0.008 mg/ml N.D. N.D. +0.2 -0.4 N.D.
carbon source Carbon source D-Glucose 10 mM N.D. N.D. -0.4 +0.2 N.D.
anaerobic Nitrate reduction with yeast extract N.D. N.D. -0.4 +0.2 N.D.
carbon source L-Arabinose (C) N.D. N.D. +0.3 -0.4 N.D.
carbon source D-Galactose (C) N.D. N.D. +0.3 -0.3 N.D.
survival 4C survival; 360 hrs N.D. N.D. -0.3 +0.4 N.D.
stress Cobalt chloride 0.08 mM N.D. N.D. +0.4 -0.2 N.D.
stress Nalidixic 0.004 mg/ml N.D. N.D. -0.2 +0.5 N.D.
carbon source L-Lysine (C) N.D. N.D. +0.6 -0.2 N.D.
carbon source L-Lysine (C) N.D. N.D. +0.8 -0.3 N.D.
stress Spectinomycin 0.025 mg/ml N.D. N.D. +0.3 +0.4 N.D.
stress KB-half, Pseudo5 supernatant N.D. N.D. +0.2 +0.8 N.D.
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