Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22110 and AO356_22115 are separated by 59 nucleotidesAO356_22115 and AO356_22120 are separated by 176 nucleotidesAO356_22120 and AO356_22125 are separated by 471 nucleotidesAO356_22125 and AO356_22130 are separated by 295 nucleotides AO356_22110: AO356_22110 - tRNA 2-thiouridylase, at 4,949,408 to 4,950,532 _22110 AO356_22115: AO356_22115 - NUDIX hydrolase, at 4,950,592 to 4,951,038 _22115 AO356_22120: AO356_22120 - hypothetical protein, at 4,951,215 to 4,952,096 _22120 AO356_22125: AO356_22125 - isocitrate dehydrogenase, at 4,952,568 to 4,954,793 _22125 AO356_22130: AO356_22130 - hypothetical protein, at 4,955,089 to 4,955,277 _22130
Group Condition AO356_22110 AO356_22115 AO356_22120 AO356_22125 AO356_22130
stress Cholin acetate 40 mM N.D. -0.2 -0.3 -2.2 +0.0
stress acetate 40 mM N.D. +0.0 -0.1 -2.2 -0.3
stress D-Cycloserine 0.1 mg/ml N.D. +0.1 -0.1 -2.4 -0.1
stress 1-ethyl-3-methylimidazolium acetate 20 mM N.D. +0.1 -0.0 -1.9 -0.5
motility outer cut, LB soft agar motility assay N.D. -0.1 -0.1 -1.3 -0.9
stress Sisomicin 0.001 mg/ml N.D. +0.0 +0.0 -2.1 -0.2
stress Chlorite 0.04 mM N.D. -0.2 -0.1 -1.9 +0.0
stress 1-ethyl-3-methylimidazolium acetate 5 mM N.D. +0.1 -0.1 -2.0 -0.1
stress Cephalothin 2 mg/ml N.D. +0.2 -0.0 -1.9 -0.4
stress Cholin acetate 20 mM N.D. +0.2 -0.2 -2.0 -0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM N.D. +0.1 +0.0 -2.2 +0.1
carbon source Carbon source Sucrose 5 mM N.D. -0.0 -0.2 -1.0 -0.6
stress Bacitracin 2 mg/ml N.D. -0.0 +0.0 -1.6 -0.2
stress Chlorite 0.08 mM N.D. +0.1 +0.0 -1.8 -0.0
motility outer cut, LB soft agar motility assay N.D. -0.0 -0.6 -0.7 -0.3
carbon source Carbon source D-Mannitol 10 mM N.D. -0.0 -0.1 -1.4 -0.1
carbon source Carbon source D-Mannitol 2.5 mM N.D. -0.0 -0.0 -1.2 -0.4
carbon source Carbon source Sucrose 2.5 mM N.D. +0.1 -0.0 -1.4 -0.1
stress syringaldehyde 5 mM N.D. +0.1 -0.2 -1.3 -0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. +0.4 -0.2 -1.6 +0.0
carbon source Carbon source D-Mannitol 5 mM N.D. -0.2 -0.1 -1.3 +0.3
stress nitrite 10 mM N.D. -0.3 +0.5 -1.5 +0.2
stress nitrate 200 mM N.D. +0.3 -0.1 -1.4 +0.2
carbon source L-Lysine (C) N.D. +0.3 -0.1 -1.3 +0.1
carbon source Carbon source D-Mannitol 10 mM N.D. +0.2 -0.0 -1.2 +0.1
motility outer cut, LB soft agar motility assay N.D. -0.1 +0.3 -1.3 +0.3
stress Cisplatin 0.0032 mg/ml N.D. +0.2 +0.3 -0.5 -0.7
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine N.D. +0.0 -0.0 +0.5 -1.1
carbon source acetate (C) N.D. +0.2 +0.1 +2.0 -0.1
carbon source acetate (C) N.D. +0.3 +0.0 +1.7 +0.1
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