Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22075 and AO356_22080 are separated by 108 nucleotidesAO356_22080 and AO356_22085 are separated by 456 nucleotidesAO356_22085 and AO356_22090 are separated by 242 nucleotidesAO356_22090 and AO356_22095 overlap by 8 nucleotides AO356_22075: AO356_22075 - chemotaxis protein, at 4,940,762 to 4,942,684 _22075 AO356_22080: AO356_22080 - isocitrate lyase, at 4,942,793 to 4,944,118 _22080 AO356_22085: AO356_22085 - secretin, at 4,944,575 to 4,945,336 _22085 AO356_22090: AO356_22090 - GNAT family acetyltransferase, at 4,945,579 to 4,946,004 _22090 AO356_22095: AO356_22095 - cupin, at 4,945,997 to 4,947,163 _22095
Group Condition AO356_22075 AO356_22080 AO356_22085 AO356_22090 AO356_22095
carbon source L-Leucine (C) -0.1 -5.6 +0.2 -0.2 -0.2
carbon source Tween 20 (C) +0.1 -5.7 -0.2 +0.1 -0.3
carbon source acetate (C) -0.2 -5.6 +0.3 +0.1 -0.5
carbon source acetate (C) -0.2 -5.0 +0.4 +0.6 -0.4
carbon source Carnitine Hydrochloride (C) -0.1 -4.3 -0.1 -0.1 +0.1
carbon source Ethanol (C) +0.3 -4.8 +0.0 -0.1 +0.1
carbon source Tween 20 (C) +0.2 -4.7 +0.0 +0.2 +0.2
carbon source L-Isoleucine (C) -0.3 -2.9 +0.1 -0.2 -0.2
carbon source Ethanol (C) +0.3 -3.9 +0.1 +0.2 +0.0
motility outer cut, LB soft agar motility assay -0.1 +0.1 -0.5 -2.0 -0.8
temperature LB 20C +0.1 -0.1 -0.2 -0.4 -2.2
survival 4C survival; 360 hrs +0.1 +0.2 -0.2 +0.2 -2.9
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.0 +0.0 -0.2 -0.8 -1.8
survival 4C survival; 192 hrs +0.0 +0.1 -0.1 -0.1 -2.5
carbon source NAG (C) -0.1 -1.8 -0.0 +0.2 -0.8
motility outer cut, LB soft agar motility assay -0.0 -0.0 +0.4 -1.3 -1.5
carbon source L-Lysine (C) +0.2 -4.3 -0.1 -1.0 +2.7
temperature LB 10C -0.1 -0.1 -0.1 +0.2 -2.3
carbon source Carbon source Sucrose 5 mM -0.0 -0.3 +0.2 -0.4 -1.8
temperature LB 20C +0.0 +0.0 +0.1 -0.5 -1.9
temperature LB 10C +0.0 +0.1 -0.1 -0.2 -2.1
survival 4C survival; 1152 hrs +0.0 +0.1 +0.2 +0.2 -2.5
carbon source Carbon source D,L-Lactate 10 mM -0.2 -0.5 -0.1 +0.3 -1.2
anaerobic Nitrate reduction with yeast extract +0.1 +0.3 -0.5 -1.0 -0.5
carbon source L-Lysine (C) +0.0 -4.6 +0.2 +0.1 +2.9
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.3 +0.1 -0.3 -0.5 +1.6
stress Thallium(I) acetate 0.008 mg/ml -0.0 -0.1 -0.0 +0.7 +1.5
stress Thallium(I) acetate 0.008 mg/ml +0.2 -0.1 +0.2 +0.5 +1.4
stress Sisomicin 0.001 mg/ml +1.0 +0.8 +0.2 -0.4 +0.9
stress Lomefloxacin 0.0005 mM -0.1 -0.0 +0.3 +0.1 +6.4
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