Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_21995 and AO356_22000 are separated by 303 nucleotidesAO356_22000 and AO356_22005 overlap by 1 nucleotidesAO356_22005 and AO356_22010 are separated by 261 nucleotidesAO356_22010 and AO356_22015 are separated by 7 nucleotides AO356_21995: AO356_21995 - hemerythrin, at 4,923,368 to 4,923,844 _21995 AO356_22000: AO356_22000 - plasmid stabilization protein, at 4,924,148 to 4,924,423 _22000 AO356_22005: AO356_22005 - CopG family transcriptional regulator, at 4,924,423 to 4,924,695 _22005 AO356_22010: AO356_22010 - NADH:ubiquinone oxidoreductase subunit N, at 4,924,957 to 4,926,420 _22010 AO356_22015: AO356_22015 - NADH:ubiquinone oxidoreductase subunit M, at 4,926,428 to 4,927,960 _22015
Group Condition AO356_21995 AO356_22000 AO356_22005 AO356_22010 AO356_22015
stress Lomefloxacin 0.0005 mM -0.3 -0.2 -1.6 N.D. N.D.
stress Cholin acetate 40 mM +0.1 -0.4 -1.3 N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.1 -0.3 -1.2 N.D. N.D.
survival 4C survival; 1152 hrs -0.1 -0.1 -1.2 N.D. N.D.
anaerobic Nitrate reduction with yeast extract +0.2 -0.4 -1.1 N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.0 -0.4 -0.8 N.D. N.D.
survival 4C survival; 360 hrs +0.2 -0.0 -1.3 N.D. N.D.
stress Thallium(I) acetate 0.008 mg/ml -0.4 +0.0 -0.7 N.D. N.D.
carbon source L-Proline (C) -0.3 -0.1 -0.6 N.D. N.D.
motility outer cut, LB soft agar motility assay -0.4 -0.0 -0.5 N.D. N.D.
carbon source NAG (C) -0.2 -0.1 -0.6 N.D. N.D.
survival 4C survival; 672 hrs -0.3 +0.1 -0.7 N.D. N.D.
stress nitrate 200 mM -0.0 +0.2 -1.1 N.D. N.D.
carbon source D-Ribose (C) -0.3 +0.1 -0.7 N.D. N.D.
nitrogen source Gly-Glu (N) -0.0 +0.1 -0.9 N.D. N.D.
stress copper (II) chloride 2.5 mM -0.2 +0.1 -0.7 N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.2 -0.2 -0.8 N.D. N.D.
stress acetate 40 mM +0.3 -0.3 -0.8 N.D. N.D.
carbon source D-Mannose (C) -0.1 +0.1 -0.7 N.D. N.D.
carbon source Inosine (C) -0.1 +0.1 -0.7 N.D. N.D.
carbon source Ethanol (C) +0.1 +0.1 -0.8 N.D. N.D.
nitrogen source Carnitine Hydrochloride (N) +0.0 +0.2 -0.9 N.D. N.D.
carbon source D-Trehalose (C) -0.4 +0.2 -0.5 N.D. N.D.
carbon source D-Lactate (C) -0.3 +0.2 -0.4 N.D. N.D.
carbon source L-Proline (C) +0.2 +0.2 -0.7 N.D. N.D.
stress Cisplatin 0.0032 mg/ml +0.4 -0.0 -0.6 N.D. N.D.
stress Fusidic 0.1 mg/ml +0.2 +0.2 -0.4 N.D. N.D.
temperature LB 10C +0.1 +0.4 -0.4 N.D. N.D.
lb LB +0.3 +0.4 -0.2 N.D. N.D.
stress Spectinomycin 0.025 mg/ml +0.3 +0.2 +0.4 N.D. N.D.
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