Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_21905 and AO356_21910 are separated by 35 nucleotidesAO356_21910 and AO356_21915 are separated by 36 nucleotidesAO356_21915 and AO356_21920 are separated by 292 nucleotidesAO356_21920 and AO356_21925 are separated by 86 nucleotides AO356_21905: AO356_21905 - monooxygenase, at 4,901,091 to 4,902,419 _21905 AO356_21910: AO356_21910 - phosphate ABC transporter substrate-binding protein, at 4,902,455 to 4,903,237 _21910 AO356_21915: AO356_21915 - chemotaxis protein, at 4,903,274 to 4,905,217 _21915 AO356_21920: AO356_21920 - AraC family transcriptional regulator, at 4,905,510 to 4,906,553 _21920 AO356_21925: AO356_21925 - hypothetical protein, at 4,906,640 to 4,907,053 _21925
Group Condition AO356_21905 AO356_21910 AO356_21915 AO356_21920 AO356_21925
stress Doxycycline hyclate 0.0001 mg/ml +0.4 -0.1 -0.0 -0.4 -1.6
stress methylglyoxal 0.016 vol% +0.0 +0.1 -0.3 -0.3 -0.8
stress Rifampicin 0.0016 mg/ml -0.1 -0.1 -0.1 -0.2 -0.7
stress Rifampicin 0.0024 mg/ml -0.0 -0.0 -0.0 -0.1 -1.0
stress Tetracycline 0.0001 mg/ml +0.1 -0.0 -0.1 -0.3 -0.8
stress Nalidixic 0.004 mg/ml +0.2 -0.0 -0.2 -0.1 -0.8
stress Lomefloxacin 0.0005 mM +0.2 +0.2 -0.0 -0.1 -1.1
stress Fusidic 0.1 mg/ml -0.0 +0.0 -0.2 +0.1 -0.7
carbon source Carnitine Hydrochloride (C) +0.2 +0.0 -0.1 -0.6 -0.3
stress syringaldehyde 10 mM -0.1 -0.1 -0.2 +0.1 -0.5
carbon source L-Lysine (C) -0.1 -0.2 +0.1 -0.3 -0.2
carbon source D-Lactate (C) +0.0 +0.1 -0.0 +0.0 -0.7
carbon source D-Xylose (C) +0.0 +0.1 -0.1 -0.1 -0.6
stress Spectinomycin 0.025 mg/ml +0.1 -0.2 +0.1 -0.2 -0.4
carbon source acetate (C) +0.1 +0.2 -0.1 +0.1 -0.8
pH Minimal media pH6 +0.1 -0.1 -0.0 +0.1 -0.6
anaerobic Nitrate reduction with yeast extract -0.2 +0.0 -0.2 +0.2 -0.3
stress Sisomicin 0.001 mg/ml +0.2 +0.1 +0.0 -0.2 -0.6
carbon source acetate (C) +0.0 +0.1 -0.1 +0.2 -0.6
stress copper (II) chloride 2.5 mM -0.3 +0.1 -0.3 +0.2 -0.0
nitrogen source Gly-Glu (N) +0.2 +0.1 -0.2 -0.1 -0.3
nitrogen source D-Glucosamine Hydrochloride (N) +0.1 +0.0 -0.1 +0.2 -0.4
stress Nickel (II) chloride 0.625 mM +0.0 +0.2 -0.1 +0.3 -0.4
stress Choline chloride 500 mM -0.0 -0.1 +0.2 +0.3 -0.3
motility outer cut, LB soft agar motility assay +0.2 -0.2 +0.1 +0.2 -0.3
carbon source L-Histidine (C) +0.2 -0.2 +0.2 -0.2 +0.1
survival 4C survival; 672 hrs +0.1 -0.1 -0.2 -0.1 +0.8
nitrogen source Urea (N) +0.5 +0.1 +0.1 +0.1 +0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 -0.1 +0.0 +0.1 +1.3
survival 4C survival; 1152 hrs +0.0 -0.2 -0.1 +0.2 +2.5
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