Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_21845 and AO356_21850 overlap by 1 nucleotidesAO356_21850 and AO356_21855 are separated by 202 nucleotidesAO356_21855 and AO356_21860 are separated by 182 nucleotidesAO356_21860 and AO356_21865 are separated by 42 nucleotides AO356_21845: AO356_21845 - electron transporter RnfB, at 4,891,540 to 4,892,289 _21845 AO356_21850: AO356_21850 - electron transfer flavoprotein subunit beta, at 4,892,289 to 4,893,224 _21850 AO356_21855: AO356_21855 - glycine/betaine ABC transporter substrate-binding protein, at 4,893,427 to 4,894,326 _21855 AO356_21860: AO356_21860 - transcriptional regulator, at 4,894,509 to 4,895,153 _21860 AO356_21865: AO356_21865 - hypothetical protein, at 4,895,196 to 4,895,462 _21865
Group Condition AO356_21845 AO356_21850 AO356_21855 AO356_21860 AO356_21865
stress methylglyoxal 0.016 vol% -0.5 -0.3 -0.1 -0.3 -0.8
anaerobic Nitrate reduction with yeast extract +0.5 -0.9 +0.2 +0.4 -1.7
carbon source D-Fructose (C) -0.3 -0.1 -0.2 +0.1 -0.7
stress copper (II) chloride 2.5 mM -0.5 +0.3 +0.3 -0.3 -0.8
carbon source Ethanol (C) -0.3 -0.2 +0.2 -0.1 -0.4
carbon source L-Glutamine (C) -0.2 -0.2 +0.1 +0.1 -0.5
stress Lomefloxacin 0.0005 mM -0.4 +0.2 +0.0 +0.1 -0.6
temperature LB 20C +0.3 +0.2 -0.2 -0.2 -0.7
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.2 +0.1 -0.1 -0.4 -0.4
carbon source Carbon source D-Mannitol 5 mM +0.0 -0.3 +0.3 -0.2 -0.6
carbon source pyruvate (C) -0.3 -0.0 -0.1 +0.2 -0.4
carbon source Ethanol (C) -0.1 -0.1 +0.2 +0.2 -0.8
nitrogen source Urea (N) -0.4 -0.3 -0.1 -0.1 +0.3
carbon source Carbon source D-Mannitol 10 mM -0.0 +0.2 +0.1 -0.2 -0.6
carbon source D-Alanine (C) -0.2 +0.1 -0.4 -0.3 +0.3
carbon source L-Lysine (C) +0.1 -0.1 +0.2 +0.2 -0.8
carbon source Tween 20 (C) +0.1 -0.4 +0.2 +0.1 -0.3
stress Benzalkonium Chloride 0.016 mg/ml -0.0 +0.2 -0.5 -0.4 +0.5
carbon source L-Leucine (C) -0.1 -0.4 -0.2 +0.1 +0.5
motility outer cut, LB soft agar motility assay +0.4 +0.4 -0.2 -0.4 -0.3
carbon source L-Arginine (C) -0.0 +0.2 +0.4 -0.0 -0.4
stress Nalidixic 0.004 mg/ml -0.0 +0.3 -0.3 -0.0 +0.5
carbon source L-Asparagine (C) +0.1 +0.2 +0.4 +0.2 -0.4
stress nitrate 200 mM -0.1 +0.2 -0.2 +0.3 +0.3
nitrogen source L-tyrosine (N) +0.1 -0.1 -0.1 +0.3 +0.5
nitrogen source L-Phenylalanine (N) +0.3 +0.3 -0.3 +0.1 +0.4
nitrogen source D-Alanine (N) +0.1 +0.2 -0.1 +0.2 +0.7
motility outer cut, LB soft agar motility assay +0.1 +0.0 +0.3 +0.1 +0.6
stress KB-half, Pseudo5 supernatant +0.7 +0.1 +0.1 -0.2 +0.5
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.6 +0.1 +0.1 -0.6 +1.0
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