Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 198 experiments or choose conditions or try the comparative fitness browser

500 ntAO356_21785 and AO356_21790 overlap by 1 nucleotidesAO356_21790 and AO356_21795 overlap by 4 nucleotidesAO356_21795 and AO356_21800 overlap by 4 nucleotidesAO356_21800 and AO356_21805 are separated by 214 nucleotides AO356_21785: AO356_21785 - ABC transporter permease, at 4,876,766 to 4,877,548 _21785 AO356_21790: AO356_21790 - sulfonate ABC transporter ATP-binding protein, at 4,877,548 to 4,878,396 _21790 AO356_21795: AO356_21795 - PBS lyase, at 4,878,393 to 4,879,355 _21795 AO356_21800: AO356_21800 - hypothetical protein, at 4,879,352 to 4,879,639 _21800 AO356_21805: AO356_21805 - LexA family transcriptional regulator, at 4,879,854 to 4,880,471 _21805
Group Condition AO356_21785 AO356_21790 AO356_21795 AO356_21800 AO356_21805
stress Paraquat dichloride 0.0625 mg/ml -0.4 -0.9 -1.2 N.D. -0.3
stress Doxycycline hyclate 0.0001 mg/ml -0.5 -0.8 -1.3 N.D. +0.1
stress copper (II) chloride 2.5 mM -0.1 -1.3 -1.0 N.D. +0.3
stress Thallium(I) acetate 0.008 mg/ml -0.1 -0.4 -1.2 N.D. -0.4
stress Choline chloride 300 mM -0.1 -0.4 -1.3 N.D. -0.3
lb LB -0.2 -0.7 -1.1 N.D. +0.1
pH Minimal media pH8 +0.1 -0.0 -1.7 N.D. -0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.5 -0.5 -0.7 N.D. +0.0
stress methylglyoxal 0.016 vol% +0.3 -1.0 -0.8 N.D. -0.3
stress Vanillin 1.25 mM +0.3 -0.6 -1.0 N.D. -0.2
carbon source D-Ribose (C) -0.2 -0.4 -1.2 N.D. +0.3
temperature LB 37C -0.1 -0.3 -1.2 N.D. +0.1
stress Lomefloxacin 0.0005 mM -0.1 -0.7 -0.9 N.D. +0.4
stress Cephalothin 2 mg/ml -0.3 +0.2 -0.9 N.D. -0.4
motility outer cut, LB soft agar motility assay -0.6 -1.2 +1.1 N.D. -0.5
carbon source L-Lactate (C) -0.2 -1.9 +0.6 N.D. +0.4
motility outer cut, LB soft agar motility assay -0.0 -0.5 -0.9 N.D. +0.3
carbon source NAG (C) -0.0 -0.4 -1.0 N.D. +0.3
stress Cholin acetate 20 mM -0.1 +0.7 -0.7 N.D. -0.8
survival 4C survival; 24 hrs -0.4 +0.2 -1.2 N.D. +0.6
carbon source Carbon source D-Mannitol 2.5 mM +0.5 +0.6 -2.2 N.D. +0.5
temperature LB 30C -0.0 +0.6 -0.5 N.D. -0.7
anaerobic Nitrate reduction with yeast extract +0.5 -1.7 +1.0 N.D. -0.1
carbon source Fumarate (C) -0.4 -0.7 +0.6 N.D. +0.4
carbon source Carbon source Sucrose 5 mM +0.4 -0.7 +0.7 N.D. -0.3
carbon source acetate (C) -0.3 -0.5 +0.8 N.D. +0.3
carbon source Carbon source D,L-Lactate 10 mM +0.1 +1.0 -0.7 N.D. +0.0
stress nitrate 200 mM -0.2 +0.8 +0.8 N.D. -0.4
stress KB-half, Pseudo5 supernatant +0.5 +1.5 -0.5 N.D. +0.0
carbon source Carbon source Sucrose 10 mM +0.3 +1.5 -0.1 N.D. -0.1
remove
AO356_21785
plot
remove
AO356_21790
plot
remove
AO356_21795
remove
AO356_21800
plot
remove
AO356_21805
plot