Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_21750 and AO356_21755 are separated by 206 nucleotidesAO356_21755 and AO356_21760 are separated by 89 nucleotidesAO356_21760 and AO356_21765 are separated by 105 nucleotidesAO356_21765 and AO356_21770 overlap by 8 nucleotides AO356_21750: AO356_21750 - hypothetical protein, at 4,868,889 to 4,869,833 _21750 AO356_21755: AO356_21755 - AraC family transcriptional regulator, at 4,870,040 to 4,871,077 _21755 AO356_21760: AO356_21760 - oxidoreductase, at 4,871,167 to 4,872,138 _21760 AO356_21765: AO356_21765 - GntR family transcriptional regulator, at 4,872,244 to 4,873,002 _21765 AO356_21770: AO356_21770 - oxidoreductase, at 4,872,995 to 4,874,725 _21770
Group Condition AO356_21750 AO356_21755 AO356_21760 AO356_21765 AO356_21770
anaerobic Nitrate reduction with yeast extract +0.3 +0.2 -0.2 -2.6 -0.0
stress copper (II) chloride 2.5 mM +0.1 +0.8 +0.1 -2.8 +0.2
carbon source Tween 20 (C) +0.0 -0.3 -0.0 -1.2 +0.0
nitrogen source Urea (N) -0.2 +0.0 -0.0 -1.2 -0.0
carbon source Carbon source D-Mannitol 10 mM -0.0 -0.1 +0.1 -1.2 -0.0
carbon source L-Malic (C) +0.0 -0.1 -0.0 -1.2 -0.0
carbon source L-Asparagine (C) -0.0 -0.4 -0.1 -0.7 +0.0
stress Paraquat dichloride 0.0625 mg/ml -0.1 -0.0 -0.2 -0.8 +0.0
carbon source L-Histidine (C) +0.1 -0.2 -0.1 -0.7 -0.1
carbon source L-Lysine (C) -0.2 +0.1 +0.2 -1.3 +0.1
stress nitrate 200 mM -0.1 -0.2 +0.2 -0.7 -0.2
pH Minimal media pH9 +0.1 -0.2 -0.1 -0.8 +0.1
stress Thallium(I) acetate 0.008 mg/ml -0.2 +0.2 +0.0 -0.9 +0.1
carbon source Carbon source D-Glucose 10 mM -0.1 -0.6 +0.2 -0.2 -0.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM +0.0 +0.0 +0.2 -0.9 -0.2
stress KB-half, Pseudo5 supernatant -0.1 +0.3 +0.3 -0.8 -0.1
stress Sisomicin 0.001 mg/ml +0.1 +0.7 +0.1 -1.1 +0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +0.2 +0.3 -0.5 +0.1
carbon source Carbon source D,L-Lactate 10 mM -0.2 -0.1 -0.2 +1.0 +0.0
motility outer cut, LB soft agar motility assay +0.0 -0.2 -0.2 +1.1 -0.2
stress Cephalothin 2 mg/ml +0.1 -0.3 +0.2 +0.5 +0.1
nitrogen source nitrite (N) -0.0 -0.2 -0.1 +1.0 -0.0
lb LB +0.1 -0.3 +0.0 +1.0 -0.2
stress methylglyoxal 0.016 vol% -0.2 +0.0 +0.1 +0.9 +0.0
carbon source D-Xylose (C) -0.1 +0.4 -0.1 +0.6 +0.2
lb LB +0.1 -0.1 -0.1 +1.0 +0.1
stress Spectinomycin 0.025 mg/ml -0.0 +0.2 +0.0 +1.0 -0.2
motility outer cut, LB soft agar motility assay -0.1 -0.5 +0.3 +1.5 +0.0
stress Vanillin 1.25 mM -0.0 +0.0 -0.0 +1.3 -0.1
stress D-Cycloserine 0.1 mg/ml +0.1 +0.2 +0.1 +0.8 +0.1
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