Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_21375 and AO356_21380 are separated by 382 nucleotidesAO356_21380 and AO356_21385 are separated by 119 nucleotidesAO356_21385 and AO356_21390 are separated by 62 nucleotidesAO356_21390 and AO356_21395 are separated by 69 nucleotides AO356_21375: AO356_21375 - 4-hydroxybenzoyl-CoA thioesterase, at 4,791,102 to 4,791,551 _21375 AO356_21380: AO356_21380 - tRNA-dihydrouridine synthase C, at 4,791,934 to 4,792,893 _21380 AO356_21385: AO356_21385 - heat-shock protein, at 4,793,013 to 4,793,465 _21385 AO356_21390: AO356_21390 - histidine kinase, at 4,793,528 to 4,796,806 _21390 AO356_21395: AO356_21395 - LysR family transcriptional regulator, at 4,796,876 to 4,797,766 _21395
Group Condition AO356_21375 AO356_21380 AO356_21385 AO356_21390 AO356_21395
survival 4C survival; 192 hrs -0.6 +0.0 -0.3 -0.0 -0.2
stress perchlorate 75 mM +0.1 -0.1 -0.3 -0.0 -0.4
carbon source Carbon source D-Mannitol 10 mM +0.1 -0.0 -0.6 +0.1 -0.1
anaerobic Nitrate reduction with yeast extract -0.2 +0.3 -0.3 +0.1 -0.4
carbon source L-Lactate (C) +0.1 -0.2 -0.5 +0.1 +0.1
carbon source Carbon source D-Mannitol 2.5 mM -0.3 +0.3 -0.3 -0.0 -0.1
carbon source D-Xylose (C) -0.3 -0.2 -0.1 +0.1 +0.3
pH Minimal media pH8 -0.4 +0.1 +0.2 +0.1 -0.2
stress Cholin acetate 40 mM -0.3 +0.1 -0.2 -0.2 +0.3
stress copper (II) chloride 2.5 mM +0.3 -0.4 +0.3 -0.0 -0.4
stress Thallium(I) acetate 0.008 mg/ml +0.3 +0.2 -0.2 -0.1 -0.3
carbon source D-Alanine (C) +0.4 -0.3 +0.2 -0.2 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 +0.5 -0.1 -0.4 +0.3
stress acetate 40 mM -0.7 +0.0 +0.2 +0.0 +0.5
stress Choline chloride 500 mM -0.3 +0.2 +0.4 -0.3 +0.2
survival 4C survival; 672 hrs -0.1 +0.0 -0.3 +0.2 +0.5
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.2 +0.1 +0.2 -0.1 +0.5
stress Cholin acetate 20 mM -0.3 +0.3 +0.3 -0.0 +0.3
stress Cobalt chloride 0.08 mM +0.2 +0.1 -0.3 -0.0 +0.6
survival 4C survival; 1152 hrs -0.4 +0.2 -0.6 +0.3 +1.1
stress Benzalkonium Chloride 0.016 mg/ml +0.1 +0.1 -0.2 +0.3 +0.4
stress KB-half, Pseudo5 supernatant +0.2 +0.4 -0.3 +0.0 +0.5
stress Cobalt chloride 0.08 mM +0.2 +0.0 +0.2 -0.1 +0.5
stress Lomefloxacin 0.0005 mM +0.2 +0.7 +0.1 -0.0 +0.0
motility outer cut, LB soft agar motility assay +0.1 +0.1 +0.4 +0.0 +0.4
stress Ceftazidime 0.2 mg/ml +0.2 +0.2 +0.3 +0.2 +0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.1 +0.4 +0.6 -0.0 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.3 +0.4 +0.5 +0.2 -0.1
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.1 +0.5 +0.1 +0.0 +0.6
stress Nickel (II) chloride 0.625 mM +0.1 -0.0 +0.4 +0.1 +0.8
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