Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_21200 and AO356_21205 are separated by 202 nucleotidesAO356_21205 and AO356_21210 are separated by 180 nucleotidesAO356_21210 and AO356_21215 are separated by 220 nucleotidesAO356_21215 and AO356_21220 are separated by 37 nucleotides AO356_21200: AO356_21200 - quercetin 2,3-dioxygenase, at 4,756,900 to 4,757,766 _21200 AO356_21205: AO356_21205 - mechanosensitive ion channel protein MscS, at 4,757,969 to 4,759,411 _21205 AO356_21210: AO356_21210 - alkylhydroperoxidase, at 4,759,592 to 4,760,032 _21210 AO356_21215: AO356_21215 - RNA polymerase subunit sigma-24, at 4,760,253 to 4,760,753 _21215 AO356_21220: AO356_21220 - peptide ABC transporter substrate-binding protein, at 4,760,791 to 4,761,774 _21220
Group Condition AO356_21200 AO356_21205 AO356_21210 AO356_21215 AO356_21220
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.9 -0.2 N.D. +0.1 -2.2
anaerobic Nitrate reduction with yeast extract -1.9 -0.8 N.D. -1.2 +0.8
stress Sisomicin 0.001 mg/ml -0.5 +0.0 N.D. +0.1 -1.7
stress Chlorite 0.04 mM -1.3 -0.2 N.D. +0.2 -0.8
stress Aluminum chloride 5 mM -1.1 -0.3 N.D. +0.1 -0.6
stress Lomefloxacin 0.0005 mM -1.0 +0.1 N.D. -0.3 -0.6
motility outer cut, LB soft agar motility assay -1.9 -0.1 N.D. +0.4 +0.1
stress Spectinomycin 0.025 mg/ml -1.5 -0.0 N.D. +0.6 -0.5
stress Rifampicin 0.0016 mg/ml -1.0 -0.6 N.D. +0.3 -0.2
carbon source L-Lysine (C) -1.0 -0.2 N.D. +0.8 -0.9
stress copper (II) chloride 2.5 mM +0.8 +0.4 N.D. +0.4 -2.7
survival 4C survival; 1152 hrs -1.7 +0.2 N.D. +0.0 +0.4
carbon source Carbon source Sucrose 2.5 mM -1.7 +0.3 N.D. +0.1 +0.6
motility outer cut, LB soft agar motility assay -1.0 -0.2 N.D. +0.1 +0.7
stress nitrate 200 mM +0.8 -0.1 N.D. -0.1 -0.9
carbon source L-Lysine (C) -0.2 +0.4 N.D. +0.6 -0.6
stress Cholin acetate 20 mM +0.9 +0.2 N.D. +0.0 -0.8
motility outer cut, LB soft agar motility assay -0.5 -0.3 N.D. +0.0 +1.3
stress methylglyoxal 0.016 vol% -0.8 +0.4 N.D. +0.2 +0.8
carbon source Ethanol (C) +0.8 -0.0 N.D. +0.5 -0.7
stress Choline chloride 500 mM +1.1 +0.4 N.D. -0.3 -0.4
stress KB-half, Pseudo5 supernatant -0.1 -0.7 N.D. +1.1 +0.7
nitrogen source D-Alanine (N) +0.5 +0.1 N.D. -0.6 +1.1
motility outer cut, LB soft agar motility assay +1.0 -0.4 N.D. +0.3 +0.2
carbon source L-Histidine (C) +1.1 -0.3 N.D. +0.3 +0.2
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +1.0 +0.4 N.D. -0.3 +0.2
carbon source D-Lactate (C) +0.5 +0.4 N.D. -0.1 +0.9
carbon source L-Arabinose (C) +0.9 +0.5 N.D. +0.0 +0.5
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.7 +0.7 N.D. -0.2 +0.6
carbon source D-Sorbitol (C) +1.1 -0.0 N.D. +0.6 +0.5
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