Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_21010 and AO356_21015 are separated by 154 nucleotidesAO356_21015 and AO356_21020 are separated by 464 nucleotidesAO356_21020 and AO356_21025 are separated by 176 nucleotidesAO356_21025 and AO356_21030 are separated by 203 nucleotides AO356_21010: AO356_21010 - urease-associated protein, at 4,676,030 to 4,676,431 _21010 AO356_21015: AO356_21015 - vanillate O-demethylase oxidoreductase VanB, at 4,676,586 to 4,677,044 _21015 AO356_21020: AO356_21020 - hypothetical protein, at 4,677,509 to 4,677,970 _21020 AO356_21025: AO356_21025 - AraC family transcriptional regulator, at 4,678,147 to 4,679,094 _21025 AO356_21030: AO356_21030 - oxidoreductase, at 4,679,298 to 4,680,035 _21030
Group Condition AO356_21010 AO356_21015 AO356_21020 AO356_21025 AO356_21030
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 +0.0 -1.5 -0.3 -0.3
stress Cholin acetate 40 mM -0.2 +0.1 -0.4 -0.2 -0.6
stress Cisplatin 0.0032 mg/ml +0.1 -0.6 -0.4 -0.0 -0.1
carbon source D-Lactate (C) -0.1 -0.4 -0.3 +0.3 -0.3
carbon source D,L-Lactate (C) -0.0 -0.4 -0.3 +0.3 -0.2
carbon source Carbon source D,L-Lactate 10 mM -0.3 -0.1 +0.4 -0.2 -0.3
motility outer cut, LB soft agar motility assay -0.2 +0.4 -0.2 +0.2 -0.5
stress methylglyoxal 0.016 vol% +0.0 +0.4 +0.1 -0.2 -0.6
stress Sisomicin 0.001 mg/ml -0.4 -0.2 +0.3 +0.4 -0.0
anaerobic Nitrate reduction with yeast extract +0.3 +0.1 -0.4 -0.6 +0.6
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 +0.2 +0.4 -0.1 -0.5
survival 4C survival; 192 hrs +0.1 -0.0 -0.5 +0.0 +0.5
nitrogen source D-Alanine (N) +0.1 +0.3 -0.4 -0.3 +0.3
carbon source D-Galactose (C) -0.3 -0.1 -0.1 +0.3 +0.3
stress Chlorite 0.04 mM +0.4 +0.0 +0.3 +0.1 -0.6
carbon source pyruvate (C) -0.2 +0.1 -0.4 +0.5 +0.2
nitrogen source Carnitine Hydrochloride (N) -0.1 +0.2 -0.1 -0.2 +0.5
carbon source D-Lactate (C) -0.2 -0.4 +0.2 +0.1 +0.6
carbon source L-Lactate (C) -0.1 -0.2 -0.2 +0.4 +0.4
carbon source Carbon source D-Mannitol 2.5 mM -0.1 +0.4 +0.5 +0.1 -0.5
carbon source Carbon source D-Mannitol 5 mM -0.2 -0.1 +0.4 -0.2 +0.4
carbon source Tween 20 (C) -0.3 +0.2 +0.5 -0.0 +0.4
carbon source L-Glutamine (C) -0.2 +0.3 -0.1 +0.0 +0.6
carbon source Fumarate (C) -0.1 +0.1 -0.1 +0.2 +0.6
carbon source L-Aspartic Acid (C) -0.1 +0.1 +0.6 +0.2 -0.1
stress Lomefloxacin 0.0005 mM +0.3 +0.6 +0.6 -0.1 -0.4
carbon source L-Glutamic (C) -0.1 +0.4 +0.4 +0.2 +0.1
stress nitrite 10 mM +0.2 -0.1 +0.6 +0.3 +0.2
carbon source L-Histidine (C) +0.1 +0.3 +0.2 +0.1 +0.6
motility outer cut, LB soft agar motility assay +0.1 +0.5 +1.1 +0.1 +0.3
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