Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_21000 and AO356_21005 are separated by 153 nucleotidesAO356_21005 and AO356_21010 are separated by 118 nucleotidesAO356_21010 and AO356_21015 are separated by 154 nucleotidesAO356_21015 and AO356_21020 are separated by 464 nucleotides AO356_21000: AO356_21000 - 23S ribosomal RNA, at 4,672,727 to 4,675,642 _21000 AO356_21005: AO356_21005 - 5S ribosomal RNA, at 4,675,796 to 4,675,911 _21005 AO356_21010: AO356_21010 - urease-associated protein, at 4,676,030 to 4,676,431 _21010 AO356_21015: AO356_21015 - vanillate O-demethylase oxidoreductase VanB, at 4,676,586 to 4,677,044 _21015 AO356_21020: AO356_21020 - hypothetical protein, at 4,677,509 to 4,677,970 _21020
Group Condition AO356_21000 AO356_21005 AO356_21010 AO356_21015 AO356_21020
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. N.D. -0.0 +0.0 -1.5
stress Choline chloride 500 mM N.D. N.D. +0.0 -0.3 -0.6
stress Cisplatin 0.0032 mg/ml N.D. N.D. +0.1 -0.6 -0.4
carbon source D-Lactate (C) N.D. N.D. -0.1 -0.4 -0.3
carbon source D,L-Lactate (C) N.D. N.D. -0.0 -0.4 -0.3
carbon source pyruvate (C) N.D. N.D. -0.2 +0.1 -0.4
stress Cholin acetate 40 mM N.D. N.D. -0.2 +0.1 -0.4
carbon source D-Lactate (C) N.D. N.D. -0.2 -0.4 +0.2
stress Sisomicin 0.001 mg/ml N.D. N.D. -0.4 -0.2 +0.3
stress Nalidixic 0.004 mg/ml N.D. N.D. +0.3 +0.1 -0.5
carbon source Carbon source D,L-Lactate 10 mM N.D. N.D. -0.3 -0.1 +0.4
motility outer cut, LB soft agar motility assay N.D. N.D. -0.2 +0.4 -0.2
anaerobic Nitrate reduction with yeast extract N.D. N.D. +0.3 +0.1 -0.4
nitrogen source D-Alanine (N) N.D. N.D. +0.1 +0.3 -0.4
motility outer cut, LB soft agar motility assay N.D. N.D. +0.1 +0.3 -0.4
stress Spectinomycin 0.0125 mg/ml N.D. N.D. +0.3 +0.1 -0.3
carbon source Carbon source D-Mannitol 5 mM N.D. N.D. -0.2 -0.1 +0.4
stress 1-ethyl-3-methylimidazolium acetate 20 mM N.D. N.D. -0.3 +0.1 +0.5
carbon source Tween 20 (C) N.D. N.D. -0.3 +0.2 +0.5
stress KB-half, Pseudo5 supernatant N.D. N.D. -0.0 -0.1 +0.6
carbon source L-Malic (C) N.D. N.D. -0.1 +0.5 +0.2
carbon source Carbon source Sucrose 5 mM N.D. N.D. -0.1 +0.2 +0.5
carbon source L-Glutamic (C) N.D. N.D. -0.1 +0.4 +0.4
carbon source L-Aspartic Acid (C) N.D. N.D. -0.1 +0.1 +0.6
stress nitrite 10 mM N.D. N.D. +0.2 -0.1 +0.6
stress Vanillin 2.5 mM N.D. N.D. +0.1 +0.3 +0.4
carbon source Carbon source D-Mannitol 2.5 mM N.D. N.D. +0.0 +0.1 +0.6
carbon source Carbon source D-Mannitol 2.5 mM N.D. N.D. -0.1 +0.4 +0.5
stress Lomefloxacin 0.0005 mM N.D. N.D. +0.3 +0.6 +0.6
motility outer cut, LB soft agar motility assay N.D. N.D. +0.1 +0.5 +1.1
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