Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_20840 and AO356_20845 are separated by 281 nucleotidesAO356_20845 and AO356_20850 overlap by 1 nucleotidesAO356_20850 and AO356_20855 are separated by 5 nucleotidesAO356_20855 and AO356_20860 are separated by 283 nucleotides AO356_20840: AO356_20840 - aminodeoxychorismate synthase component I, at 4,642,363 to 4,643,706 _20840 AO356_20845: AO356_20845 - alpha-L-glutamate ligase, at 4,643,988 to 4,644,974 _20845 AO356_20850: AO356_20850 - hypothetical protein, at 4,644,974 to 4,646,506 _20850 AO356_20855: AO356_20855 - ATP-dependent zinc protease, at 4,646,512 to 4,647,048 _20855 AO356_20860: AO356_20860 - GntR family transcriptional regulator, at 4,647,332 to 4,648,045 _20860
Group Condition AO356_20840 AO356_20845 AO356_20850 AO356_20855 AO356_20860
stress Benzalkonium Chloride 0.016 mg/ml +0.4 -4.7 -4.6 -2.7 -0.0
motility outer cut, LB soft agar motility assay -0.0 -1.6 -1.6 -2.3 -1.2
stress Doxycycline hyclate 0.0001 mg/ml -0.1 -2.3 -2.3 -1.9 +0.3
stress Lomefloxacin 0.0005 mM -0.3 -1.5 -3.1 -0.4 +0.3
stress Benzalkonium Chloride 0.008 mg/ml +0.3 -1.6 -1.9 -1.4 +0.0
stress Benzethonium chloride 0.025 mM -0.4 -1.6 -1.9 -0.5 +0.1
motility outer cut, LB soft agar motility assay +0.4 -1.0 -2.0 -1.0 -0.7
stress Cholin acetate 40 mM -0.3 -1.3 -1.6 -0.9 -0.1
stress Nalidixic 0.004 mg/ml -0.4 -1.5 -1.4 -0.9 +0.1
motility outer cut, LB soft agar motility assay -0.0 -1.2 -1.9 -1.4 +0.5
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.3 -1.0 -0.9 -1.2 -0.3
stress Rifampicin 0.0024 mg/ml -0.2 -1.3 -1.1 -0.9 +0.1
pH Minimal media pH9 +0.0 -0.7 -1.9 -0.6 -0.1
pH Minimal media pH6 -0.2 -1.3 -1.4 -0.4 +0.1
motility outer cut, LB soft agar motility assay +0.1 -1.7 -0.8 -0.4 -0.1
carbon source L-Asparagine (C) -0.2 -0.8 -1.3 -0.6 +0.0
stress methylglyoxal 0.016 vol% -0.2 -1.4 -0.7 -0.5 -0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.7 -0.5 -1.1 -0.6 -0.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 -0.5 -1.7 -0.6 -0.2
stress Cholin acetate 20 mM -0.2 -0.8 -1.1 -0.4 -0.0
stress Cephalothin 2 mg/ml -0.5 -1.1 -0.7 -0.3 +0.1
stress Tetracycline 0.0001 mg/ml +0.1 -0.8 -1.0 -0.8 +0.2
stress Nickel (II) chloride 0.625 mM +0.4 -0.8 -1.0 -0.7 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.5 +0.4 -0.4 -1.0 +0.2
stress Chlorite 0.08 mM +0.5 -0.6 -1.2 +0.2 -0.2
carbon source L-Isoleucine (C) -0.0 +0.8 +0.8 +0.5 -1.0
carbon source L-Lysine (C) +0.2 +0.8 +1.0 +1.1 +0.1
carbon source L-Lysine (C) -0.2 +1.2 +1.2 +0.8 +0.4
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.3 +1.3 +1.4 +1.1 +0.1
stress Sisomicin 0.001 mg/ml +0.8 +2.3 +1.9 +1.5 +0.7
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