Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_20765 and AO356_20770 are separated by 144 nucleotidesAO356_20770 and AO356_20775 are separated by 128 nucleotidesAO356_20775 and AO356_20780 are separated by 400 nucleotidesAO356_20780 and AO356_20785 are separated by 156 nucleotides AO356_20765: AO356_20765 - phytanoyl-CoA dioxygenase, at 4,628,342 to 4,629,019 _20765 AO356_20770: AO356_20770 - hypothetical protein, at 4,629,164 to 4,629,787 _20770 AO356_20775: AO356_20775 - short-chain dehydrogenase, at 4,629,916 to 4,630,194 _20775 AO356_20780: AO356_20780 - diguanylate cyclase, at 4,630,595 to 4,632,784 _20780 AO356_20785: AO356_20785 - hypothetical protein, at 4,632,941 to 4,633,126 _20785
Group Condition AO356_20765 AO356_20770 AO356_20775 AO356_20780 AO356_20785
motility outer cut, LB soft agar motility assay -0.4 +0.4 -0.5 +0.5 -2.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 -0.3 +0.3 -0.2 -2.3
nitrogen source L-Phenylalanine (N) +0.1 -0.2 -0.2 -0.0 -1.7
carbon source Fumarate (C) +0.1 -0.0 -0.5 +0.1 -1.3
carbon source D-Trehalose (C) -0.1 -0.0 +0.0 -0.0 -1.4
carbon source L-Lysine (C) -0.3 +0.0 +0.1 -0.1 -1.2
stress Nalidixic 0.004 mg/ml -0.7 +0.1 +0.0 +0.2 -1.1
carbon source L-Arabinose (C) +0.2 +0.0 +0.1 +0.1 -1.9
carbon source D-Galactose (C) -0.0 -0.1 -0.3 +0.1 -1.0
nitrogen source Carnitine Hydrochloride (N) -0.2 -0.0 +0.1 -0.1 -1.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.1 -0.1 -0.2 +0.3 -1.1
carbon source D-Lactate (C) -0.0 +0.2 -0.5 -0.0 -0.8
carbon source Carbon source D,L-Lactate 10 mM +0.2 +0.2 -0.3 -0.1 -1.1
carbon source Carbon source D-Mannitol 5 mM -0.1 -0.0 +0.4 -0.1 -1.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.4 +0.1 -0.8 -0.2 +0.5
stress Doxycycline hyclate 0.0001 mg/ml +0.1 +0.2 -0.2 +0.1 -1.2
survival 4C survival; 192 hrs +0.3 -0.1 +0.1 +0.0 -1.0
carbon source Carbon source Sucrose 5 mM +0.3 -0.0 +0.2 +0.0 -1.1
stress KB-half, Pseudo5 supernatant -0.6 +0.1 -0.2 -0.2 +0.4
stress Sisomicin 0.001 mg/ml +0.1 +0.1 +0.7 -0.0 -1.3
carbon source Carbon source Sucrose 2.5 mM +0.2 -0.0 +0.5 +0.1 -1.2
anaerobic Nitrate reduction with yeast extract +0.5 -0.1 +0.9 -0.2 -0.5
stress Nickel (II) chloride 0.625 mM +0.3 +0.3 -0.5 +0.1 +0.3
stress Rifampicin 0.0016 mg/ml +0.1 +0.2 +0.6 +0.2 -0.5
nitrogen source D-Serine (N) -0.1 -0.0 -0.3 +0.1 +0.9
stress syringaldehyde 5 mM -0.1 -0.3 -0.3 +0.8 +0.6
stress Lomefloxacin 0.0005 mM -0.6 +0.2 +0.1 +0.2 +1.3
stress Cholin acetate 20 mM -0.2 +0.1 +0.6 +0.1 +0.8
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.1 -0.0 +0.6 +0.0 +0.7
motility outer cut, LB soft agar motility assay +0.3 +0.1 -0.2 +0.3 +0.9
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