Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_20725 and AO356_20730 are separated by 250 nucleotidesAO356_20730 and AO356_20735 are separated by 74 nucleotidesAO356_20735 and AO356_20740 are separated by 99 nucleotidesAO356_20740 and AO356_20745 are separated by 47 nucleotides AO356_20725: AO356_20725 - diaminopimelate epimerase, at 4,620,780 to 4,621,583 _20725 AO356_20730: AO356_20730 - hypothetical protein, at 4,621,834 to 4,622,394 _20730 AO356_20735: AO356_20735 - Suppressor of fused protein (SUFU), at 4,622,469 to 4,623,284 _20735 AO356_20740: AO356_20740 - cell wall assembly protein, at 4,623,384 to 4,624,007 _20740 AO356_20745: AO356_20745 - hypothetical protein, at 4,624,055 to 4,624,741 _20745
Group Condition AO356_20725 AO356_20730 AO356_20735 AO356_20740 AO356_20745
stress KB-half, Pseudo5 supernatant -0.6 -0.3 -0.2 -0.3 +0.2
anaerobic Nitrate reduction with yeast extract -0.9 -0.1 +0.5 +0.1 -0.6
pH Minimal media pH6 -0.1 -0.5 -0.2 -0.0 -0.1
temperature LB 30C -0.1 -0.2 -0.3 -0.3 +0.0
carbon source Tween 20 (C) -0.1 +0.0 -0.7 +0.0 -0.1
stress Choline chloride 300 mM +0.3 -0.4 -0.5 -0.2 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 -0.1 -0.8 +0.0 +0.1
carbon source D-Sorbitol (C) +0.0 -0.3 -0.7 +0.1 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.2 -0.4 -0.1 -0.2
carbon source D-Trehalose (C) -0.3 -0.2 -0.2 +0.1 -0.1
carbon source L-Lysine (C) -0.3 +0.1 -0.3 +0.2 -0.3
nitrogen source L-tyrosine (N) -0.3 +0.2 -0.4 -0.1 +0.1
carbon source L-Lysine (C) -0.3 -0.1 -0.1 +0.3 -0.3
carbon source m-Inositol (C) -0.4 -0.1 -0.3 +0.1 +0.1
stress perchlorate 75 mM +0.1 +0.1 -0.4 +0.0 -0.3
motility outer cut, LB soft agar motility assay -0.0 +0.1 +0.3 -0.4 -0.3
stress syringaldehyde 5 mM -0.1 -0.2 +0.4 -0.2 -0.2
stress Nickel (II) chloride 0.625 mM -0.3 -0.2 +0.4 -0.1 -0.1
stress Nickel (II) chloride 0.625 mM +0.2 -0.1 -0.2 -0.3 +0.2
stress Fusidic 0.1 mg/ml +0.4 -0.0 -0.6 +0.0 +0.0
carbon source Carbon source D-Mannitol 2.5 mM +0.1 +0.0 +0.3 +0.0 -0.6
carbon source Inosine (C) -0.1 +0.2 -0.2 -0.2 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 -0.4 +0.5 -0.1 -0.2
survival 4C survival; 360 hrs -0.2 +0.3 +0.1 -0.2 +0.1
carbon source Carbon source D-Mannitol 10 mM +0.1 -0.1 +0.3 +0.2 -0.3
carbon source Carbon source D-Mannitol 5 mM +0.3 +0.0 +0.4 +0.1 -0.3
motility outer cut, LB soft agar motility assay -0.4 +0.3 +0.3 +0.2 +0.2
nitrogen source D-Serine (N) -0.2 +0.0 +0.4 -0.1 +0.4
nitrogen source Thymine (N) +0.3 -0.1 +0.4 -0.1 +0.1
carbon source D,L-Lactate (C) +0.2 +0.1 +0.4 -0.1 +0.1
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