Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_20380 and AO356_20385 overlap by 4 nucleotidesAO356_20385 and AO356_20390 are separated by 126 nucleotidesAO356_20390 and AO356_20395 are separated by 610 nucleotidesAO356_20395 and AO356_20400 are separated by 24 nucleotides AO356_20380: AO356_20380 - hypothetical protein, at 4,550,973 to 4,551,923 _20380 AO356_20385: AO356_20385 - transglutaminase, at 4,551,920 to 4,552,726 _20385 AO356_20390: AO356_20390 - cytochrome C, at 4,552,853 to 4,553,665 _20390 AO356_20395: AO356_20395 - acetyl-CoA acetyltransferase, at 4,554,276 to 4,555,481 _20395 AO356_20400: AO356_20400 - 3-hydroxyacyl-CoA dehydrogenase, at 4,555,506 to 4,557,650 _20400
Group Condition AO356_20380 AO356_20385 AO356_20390 AO356_20395 AO356_20400
carbon source D-Glucose (C) -0.3 -0.0 -0.2 -1.5 -0.3
stress methylglyoxal 0.016 vol% +0.1 -0.2 +0.2 -1.4 -0.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 -0.1 -0.4 -0.8 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.2 -0.1 -0.1 -0.7 -0.1
carbon source L-Isoleucine (C) -0.1 -0.0 +0.0 -1.0 -0.0
carbon source casaminos (C) -0.0 +0.0 -0.2 -0.9 -0.0
stress Choline chloride 300 mM -0.2 +0.0 -0.1 -0.9 +0.1
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.2 +0.0 -0.2 -1.0 +0.0
carbon source Tween 20 (C) -0.1 -0.0 +0.0 -0.9 +0.0
motility outer cut, LB soft agar motility assay +0.1 -0.2 -0.2 -0.6 +0.1
anaerobic Nitrate reduction with yeast extract -0.1 +0.2 -0.8 -0.0 +0.1
carbon source L-Aspartic Acid (C) -0.1 +0.3 -0.2 -0.5 -0.1
carbon source Carbon source Sucrose 10 mM -0.3 +0.0 -0.2 -0.3 +0.4
carbon source Carbon source Sucrose 5 mM -0.1 -0.1 -0.1 -0.5 +0.3
stress Vanillin 1.25 mM +0.3 +0.1 +0.1 -0.9 +0.0
carbon source L-Lysine (C) -0.4 -0.0 -0.4 +0.5 +0.0
carbon source D-Xylose (C) -0.2 -0.0 -0.4 +0.2 +0.2
stress Chlorite 0.08 mM +0.1 +0.4 +0.1 -0.9 -0.0
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.3 +0.2 -0.0 -0.7 +0.1
stress acetate 40 mM +0.3 -0.0 -0.4 -0.2 +0.3
nitrogen source L-Isoleucine (N) -0.1 +0.1 -0.2 +0.5 -0.3
pH Minimal media pH9 +0.3 +0.2 -0.1 -0.5 +0.3
lb LB +0.1 +0.1 +0.1 -0.5 +0.3
pH Minimal media pH8 +0.2 -0.2 +0.2 +0.3 -0.2
carbon source D-Fructose (C) -0.3 +0.1 -0.1 +0.6 +0.0
stress Cholin acetate 20 mM -0.2 +0.2 +0.2 +0.3 +0.3
carbon source L-Lysine (C) +0.2 +0.2 +0.1 +0.5 +0.1
stress copper (II) chloride 2.5 mM -0.1 -0.1 +0.4 +1.1 -0.2
stress KB-half, Pseudo5 supernatant +0.6 +0.2 -0.1 +1.0 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.7 +0.6 -0.0 +0.8 +0.2
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