Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_20195 and AO356_20200 are separated by 49 nucleotidesAO356_20200 and AO356_20205 are separated by 11 nucleotidesAO356_20205 and AO356_20210 are separated by 384 nucleotidesAO356_20210 and AO356_20215 are separated by 156 nucleotides AO356_20195: AO356_20195 - DNA polymerase III subunit delta', at 4,516,641 to 4,517,627 _20195 AO356_20200: AO356_20200 - pilus assembly protein PilZ, at 4,517,677 to 4,518,033 _20200 AO356_20205: AO356_20205 - hydrolase TatD, at 4,518,045 to 4,518,839 _20205 AO356_20210: AO356_20210 - TetR family transcriptional regulator, at 4,519,224 to 4,519,862 _20210 AO356_20215: AO356_20215 - radical SAM protein, at 4,520,019 to 4,520,987 _20215
Group Condition AO356_20195 AO356_20200 AO356_20205 AO356_20210 AO356_20215
carbon source L-Histidine (C) N.D. -0.2 -0.1 -0.2 -3.8
carbon source L-Histidine (C) N.D. -0.1 -0.1 -0.1 -3.0
stress Chlorite 0.08 mM N.D. -0.1 -0.1 -0.3 -2.6
stress Sisomicin 0.001 mg/ml N.D. -0.4 -0.3 -1.5 -0.4
carbon source Carbon source D-Mannitol 2.5 mM N.D. -0.3 -0.1 -0.6 -1.2
anaerobic Nitrate reduction with yeast extract N.D. -0.1 +0.1 -0.8 -1.3
carbon source Carbon source Sucrose 2.5 mM N.D. -0.3 +0.1 -0.3 -1.4
carbon source Carbon source Sucrose 10 mM N.D. -0.2 +0.0 -0.4 -1.2
carbon source Carbon source Sucrose 2.5 mM N.D. -0.2 +0.0 -0.1 -1.6
carbon source Carbon source D-Mannitol 10 mM N.D. -0.2 -0.1 -0.7 -0.7
stress Chlorite 0.04 mM N.D. +0.1 +0.1 +0.4 -2.1
carbon source Carbon source Sucrose 5 mM N.D. -0.1 -0.1 -0.4 -1.0
carbon source Carbon source D-Mannitol 2.5 mM N.D. -0.1 +0.1 -0.4 -1.1
carbon source Carbon source D-Mannitol 10 mM N.D. -0.2 +0.1 -0.3 -0.9
pH Minimal media pH9 N.D. -0.2 +0.0 -0.3 -0.8
nitrogen source Carnitine Hydrochloride (N) N.D. -0.0 -0.2 -0.2 -0.9
carbon source Carbon source Sucrose 10 mM N.D. -0.1 +0.1 -0.3 -0.9
carbon source Carbon source D-Mannitol 5 mM N.D. -0.3 +0.2 -0.2 -0.8
carbon source Carbon source Sucrose 5 mM N.D. -0.3 +0.0 -0.2 -0.7
motility outer cut, LB soft agar motility assay N.D. -0.4 +0.1 +0.2 -1.1
motility outer cut, LB soft agar motility assay N.D. -0.5 -0.1 +0.3 -0.8
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. -0.5 -0.3 -0.6 +0.3
nitrogen source Adenine (N) N.D. -0.1 -0.0 +0.2 -1.1
stress perchlorate 75 mM N.D. +0.1 +0.0 -1.0 -0.0
carbon source Inosine (C) N.D. +0.1 -0.2 +0.2 -0.9
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. +0.1 -0.2 +0.6 -1.1
nitrogen source Inosine (N) N.D. +0.1 +0.1 +0.8 -1.4
nitrogen source L-Phenylalanine (N) N.D. -0.3 -0.1 +0.5 -0.4
motility outer cut, LB soft agar motility assay N.D. +0.4 +0.3 +0.3 -0.7
stress Benzalkonium Chloride 0.016 mg/ml N.D. -0.1 +0.6 +1.6 +0.7
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