Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_20095 and AO356_20100 are separated by 279 nucleotidesAO356_20100 and AO356_20105 overlap by 4 nucleotidesAO356_20105 and AO356_20110 overlap by 1 nucleotidesAO356_20110 and AO356_20115 are separated by 20 nucleotides AO356_20095: AO356_20095 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 4,495,464 to 4,496,483 _20095 AO356_20100: AO356_20100 - (2Fe-2S)-binding protein, at 4,496,763 to 4,497,233 _20100 AO356_20105: AO356_20105 - acylaldehyde oxidase, at 4,497,230 to 4,499,545 _20105 AO356_20110: AO356_20110 - hypothetical protein, at 4,499,545 to 4,500,516 _20110 AO356_20115: AO356_20115 - molybdopterin-guanine dinucleotide biosynthesis protein MobA, at 4,500,537 to 4,501,127 _20115
Group Condition AO356_20095 AO356_20100 AO356_20105 AO356_20110 AO356_20115
motility outer cut, LB soft agar motility assay N.D. -0.5 -0.0 -0.7 -0.1
stress methylglyoxal 0.016 vol% N.D. -0.3 -0.2 +0.0 -0.4
pH Minimal media pH9 N.D. -0.4 -0.0 -0.4 -0.2
stress Thallium(I) acetate 0.008 mg/ml N.D. -0.4 -0.1 -0.0 -0.1
stress Cholin acetate 40 mM N.D. -0.4 -0.3 +0.1 -0.1
carbon source L-Arginine (C) N.D. -0.1 -0.1 -0.1 -0.4
survival 4C survival; 1152 hrs N.D. -0.1 -0.2 +0.0 -0.3
anaerobic Nitrate reduction with yeast extract N.D. -0.2 +0.1 -0.2 -0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. -0.9 +0.2 +0.3 -0.0
stress Chlorite 0.04 mM N.D. +0.1 -0.1 +0.0 -0.5
temperature LB 30C N.D. -0.3 -0.1 -0.2 +0.1
stress Choline chloride 500 mM N.D. +0.2 -0.2 -0.2 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. +0.3 +0.1 -0.5 -0.2
nitrogen source Adenine (N) N.D. +0.3 -0.0 -0.3 -0.2
carbon source L-Aspartic Acid (C) N.D. +0.1 +0.0 +0.1 -0.5
motility outer cut, LB soft agar motility assay N.D. +0.3 -0.1 -0.2 -0.2
motility outer cut, LB soft agar motility assay N.D. +0.1 +0.1 +0.2 -0.6
carbon source Carbon source Sucrose 10 mM N.D. +0.3 +0.1 -0.2 -0.4
stress copper (II) chloride 2.5 mM N.D. -0.2 +0.1 -0.2 +0.2
stress KB-half, Pseudo5 supernatant N.D. -0.5 +0.1 +0.2 +0.1
survival 4C survival; 192 hrs N.D. +0.3 -0.2 -0.2 +0.1
carbon source D-Galactose (C) N.D. +0.1 -0.2 -0.2 +0.2
survival 4C survival; 360 hrs N.D. +0.2 -0.0 -0.3 +0.1
stress Benzalkonium Chloride 0.016 mg/ml N.D. +0.2 +0.1 +0.1 -0.4
stress 1-ethyl-3-methylimidazolium acetate 5 mM N.D. -0.3 +0.1 +0.1 +0.2
carbon source L-Arabinose (C) N.D. -0.2 +0.0 -0.2 +0.5
nitrogen source L-tyrosine (N) N.D. +0.4 -0.1 +0.2 -0.2
nitrogen source Urea (N) N.D. +0.3 +0.1 -0.1 +0.1
stress Rifampicin 0.0016 mg/ml N.D. +0.2 +0.2 -0.1 +0.3
carbon source succinate (C) N.D. +0.2 +0.0 -0.0 +0.3
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