Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_19930 and AO356_19935 are separated by 300 nucleotidesAO356_19935 and AO356_19940 are separated by 156 nucleotidesAO356_19940 and AO356_19945 are separated by 26 nucleotidesAO356_19945 and AO356_19950 are separated by 2 nucleotides AO356_19930: AO356_19930 - AraC family transcriptional regulator, at 4,464,728 to 4,465,597 _19930 AO356_19935: AO356_19935 - pilus assembly protein PilA, at 4,465,898 to 4,466,092 _19935 AO356_19940: AO356_19940 - pilus assembly protein PilA, at 4,466,249 to 4,466,443 _19940 AO356_19945: AO356_19945 - hypothetical protein, at 4,466,470 to 4,467,000 _19945 AO356_19950: AO356_19950 - AAA family ATPase, at 4,467,003 to 4,468,331 _19950
Group Condition AO356_19930 AO356_19935 AO356_19940 AO356_19945 AO356_19950
stress Sisomicin 0.001 mg/ml +0.0 -1.3 N.D. -0.4 -0.2
carbon source L-Lysine (C) +0.1 -1.1 N.D. -0.4 -0.1
carbon source L-Glutamine (C) +0.0 -0.6 N.D. -0.5 -0.1
carbon source L-Glutamine (C) -0.3 -0.7 N.D. -0.1 -0.1
carbon source L-Malic (C) -0.1 -0.9 N.D. -0.2 +0.0
pH Minimal media pH9 +0.1 -0.9 N.D. -0.3 -0.0
motility outer cut, LB soft agar motility assay +0.2 -1.4 N.D. +0.2 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 -0.6 N.D. -0.1 -0.3
carbon source L-Aspartic Acid (C) +0.1 -0.8 N.D. -0.2 -0.1
carbon source D-Mannose (C) -0.1 -0.8 N.D. -0.0 +0.0
carbon source L-Aspartic Acid (C) +0.1 -0.9 N.D. -0.1 -0.1
stress Cholin acetate 40 mM +0.1 -0.7 N.D. -0.2 -0.2
nitrogen source D-Alanine (N) -0.2 -0.7 N.D. -0.1 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 -0.9 N.D. +0.0 -0.0
carbon source D-Sorbitol (C) +0.2 -0.9 N.D. -0.0 +0.0
carbon source m-Inositol (C) +0.2 -0.6 N.D. -0.2 -0.1
stress Ceftazidime 0.2 mg/ml +0.3 -0.6 N.D. -0.3 -0.0
motility outer cut, LB soft agar motility assay -0.1 -0.4 N.D. +0.3 -0.2
pH Minimal media pH6 +0.2 -0.7 N.D. -0.1 +0.1
anaerobic Nitrate reduction with yeast extract -0.1 -0.3 N.D. +0.4 -0.2
lb LB +0.3 +0.4 N.D. -0.6 -0.1
motility outer cut, LB soft agar motility assay +0.3 -0.8 N.D. +0.2 +0.3
stress Chlorite 0.08 mM +0.2 -0.3 N.D. +0.5 -0.1
stress KB-half, Pseudo5 supernatant +0.3 -0.6 N.D. +0.0 +0.5
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.3 -0.6 N.D. +0.1 +0.7
resistance 20 mM putrescine -0.1 +0.6 N.D. +0.2 +0.2
stress nitrite 10 mM -0.1 +0.5 N.D. +0.6 +0.0
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.3 +0.6 N.D. -0.0 +0.2
motility outer cut, LB soft agar motility assay -0.2 +0.9 N.D. +0.5 +0.0
stress Benzalkonium Chloride 0.008 mg/ml +0.1 +0.6 N.D. +0.4 +0.1
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