Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_19920 and AO356_19925 are separated by 198 nucleotidesAO356_19925 and AO356_19930 are separated by 129 nucleotidesAO356_19930 and AO356_19935 are separated by 300 nucleotidesAO356_19935 and AO356_19940 are separated by 156 nucleotides AO356_19920: AO356_19920 - hypothetical protein, at 4,463,255 to 4,463,968 _19920 AO356_19925: AO356_19925 - AsnC family transcriptional regulator, at 4,464,167 to 4,464,598 _19925 AO356_19930: AO356_19930 - AraC family transcriptional regulator, at 4,464,728 to 4,465,597 _19930 AO356_19935: AO356_19935 - pilus assembly protein PilA, at 4,465,898 to 4,466,092 _19935 AO356_19940: AO356_19940 - pilus assembly protein PilA, at 4,466,249 to 4,466,443 _19940
Group Condition AO356_19920 AO356_19925 AO356_19930 AO356_19935 AO356_19940
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.1 -3.3 -0.0 -0.6 N.D.
carbon source Putrescine (C) +0.1 -3.7 -0.0 +0.2 N.D.
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.2 -3.4 +0.0 -0.2 N.D.
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.1 -3.8 +0.2 +0.2 N.D.
carbon source L-Proline (C) +0.1 -2.9 +0.1 -0.5 N.D.
carbon source L-Proline (C) -0.1 -2.9 +0.1 -0.2 N.D.
carbon source NAG (C) -0.2 -3.0 -0.1 +0.3 N.D.
pH Minimal media pH9 +0.2 -1.8 +0.1 -0.9 N.D.
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.6 -3.1 +0.3 -0.1 N.D.
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.1 -1.8 -0.4 -0.1 N.D.
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.1 -1.6 -0.1 -0.4 N.D.
carbon source D-Glucosamine Hydrochloride (C) +0.3 -1.9 -0.0 -0.3 N.D.
carbon source L-Lysine (C) -0.2 -0.0 +0.1 -1.1 N.D.
carbon source L-Aspartic Acid (C) -0.0 -0.4 +0.1 -0.9 N.D.
carbon source D-Mannose (C) +0.1 -0.3 -0.1 -0.8 N.D.
stress Sisomicin 0.001 mg/ml +0.3 -0.2 +0.0 -1.3 N.D.
stress Cholin acetate 40 mM -0.3 -0.1 +0.1 -0.7 N.D.
resistance 20 mM putrescine -0.1 -1.3 -0.1 +0.6 N.D.
pH Minimal media pH6 -0.1 -0.4 +0.2 -0.7 N.D.
carbon source L-Arginine (C) +0.1 -1.2 +0.0 +0.1 N.D.
carbon source D-Sorbitol (C) -0.2 +0.0 +0.2 -0.9 N.D.
carbon source L-Aspartic Acid (C) +0.1 -0.2 +0.1 -0.8 N.D.
motility outer cut, LB soft agar motility assay +0.4 -0.0 +0.2 -1.4 N.D.
carbon source L-Arginine (C) +0.2 -1.1 +0.0 +0.1 N.D.
carbon source D-Galactose (C) -0.0 -0.5 +0.4 -0.3 N.D.
nitrogen source D-Alanine (N) +0.4 +0.1 -0.2 -0.7 N.D.
motility outer cut, LB soft agar motility assay +0.3 -0.2 +0.3 -0.8 N.D.
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 +0.3 +0.1 -0.9 N.D.
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.1 +0.2 +0.3 -0.6 N.D.
motility outer cut, LB soft agar motility assay +0.2 +0.0 -0.2 +0.9 N.D.
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