Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 198 experiments or choose conditions or try the comparative fitness browser

500 ntAO356_19850 and AO356_19855 are separated by 120 nucleotidesAO356_19855 and AO356_19860 are separated by 224 nucleotidesAO356_19860 and AO356_19865 are separated by 206 nucleotidesAO356_19865 and AO356_19870 are separated by 110 nucleotides AO356_19850: AO356_19850 - orotidine 5'-phosphate decarboxylase, at 4,450,092 to 4,450,790 _19850 AO356_19855: AO356_19855 - NADP-dependent oxidoreductase, at 4,450,911 to 4,451,915 _19855 AO356_19860: AO356_19860 - short-chain dehydrogenase, at 4,452,140 to 4,452,901 _19860 AO356_19865: AO356_19865 - GntR family transcriptional regulator, at 4,453,108 to 4,454,496 _19865 AO356_19870: AO356_19870 - chemotaxis protein, at 4,454,607 to 4,456,574 _19870
Group Condition AO356_19850 AO356_19855 AO356_19860 AO356_19865 AO356_19870
motility outer cut, LB soft agar motility assay N.D. -0.1 -0.1 -0.7 -0.1
nitrogen source Urea (N) N.D. -0.2 -0.2 -0.2 -0.2
stress Choline chloride 300 mM N.D. -0.2 -0.1 -0.3 -0.1
carbon source L-Lysine (C) N.D. -0.3 -0.3 +0.0 -0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. -0.4 -0.3 +0.1 +0.0
carbon source L-Glutamine (C) N.D. -0.0 -0.0 -0.4 -0.1
motility outer cut, LB soft agar motility assay N.D. +0.0 -0.0 -0.4 -0.2
carbon source L-Histidine (C) N.D. -0.2 -0.2 -0.3 +0.2
lb LB N.D. +0.1 -0.2 -0.4 +0.1
nitrogen source Adenine (N) N.D. +0.1 -0.1 -0.1 -0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. +0.2 +0.2 -0.3 -0.5
carbon source D-Alanine (C) N.D. -0.2 -0.2 -0.1 +0.2
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine N.D. -0.0 -0.1 -0.3 +0.2
stress Sisomicin 0.001 mg/ml N.D. -0.1 -0.2 +0.3 -0.3
stress sodium fluoride 6.25 mM N.D. +0.2 -0.0 -0.4 -0.1
carbon source L-Glutamic (C) N.D. -0.1 +0.1 -0.2 +0.1
pH Minimal media pH6 N.D. -0.1 -0.1 +0.3 -0.1
survival 4C survival; 1152 hrs N.D. +0.0 -0.1 +0.3 -0.3
stress Spectinomycin 0.025 mg/ml N.D. -0.2 +0.2 -0.3 +0.2
stress 1-ethyl-3-methylimidazolium lysine 10 mM N.D. -0.1 -0.2 +0.2 +0.1
nitrogen source D-Serine (N) N.D. +0.2 -0.3 +0.1 +0.1
carbon source Carbon source D,L-Lactate 10 mM N.D. -0.3 +0.0 +0.3 -0.1
stress Nickel (II) chloride 0.625 mM N.D. -0.2 +0.1 +0.1 +0.2
carbon source Carbon source Sucrose 2.5 mM N.D. +0.1 -0.1 +0.3 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. +0.3 +0.0 -0.2 +0.1
stress KB-half, Pseudo5 supernatant N.D. +0.0 +0.4 +0.1 -0.3
stress Chlorite 0.04 mM N.D. -0.0 +0.1 +0.4 -0.1
anaerobic Nitrate reduction with yeast extract N.D. +0.0 -0.3 +0.7 +0.0
carbon source Carbon source D-Mannitol 10 mM N.D. -0.0 +0.1 +0.4 +0.1
carbon source Carbon source Sucrose 10 mM N.D. +0.3 +0.1 +0.3 -0.0
remove
AO356_19850
plot		 remove
AO356_19855
plot		 remove
AO356_19860		 remove
AO356_19865
plot		 remove
AO356_19870
plot