Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_18520 and AO356_18525 are separated by 93 nucleotidesAO356_18525 and AO356_18530 are separated by 937 nucleotidesAO356_18530 and AO356_18535 are separated by 164 nucleotidesAO356_18535 and AO356_18540 overlap by 4 nucleotides AO356_18520: AO356_18520 - leucyl aminopeptidase, at 4,166,804 to 4,167,769 _18520 AO356_18525: AO356_18525 - mercuric reductase, at 4,167,863 to 4,168,000 _18525 AO356_18530: AO356_18530 - L-tyrosine transporter (from data), at 4,168,938 to 4,170,353 _18530 AO356_18535: AO356_18535 - class I peptide chain release factor, at 4,170,518 to 4,170,931 _18535 AO356_18540: AO356_18540 - MFS transporter, at 4,170,928 to 4,172,127 _18540
Group Condition AO356_18520 AO356_18525 AO356_18530 AO356_18535 AO356_18540
nitrogen source L-tyrosine (N) -0.7 N.D. -3.5 -0.9 -0.1
stress Nalidixic 0.004 mg/ml -0.2 N.D. -0.3 -0.5 -0.1
stress perchlorate 75 mM -0.4 N.D. +0.2 -0.6 -0.0
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.2 N.D. -0.1 -0.9 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.2 N.D. -0.4 -0.0 -0.3
stress copper (II) chloride 2.5 mM -0.2 N.D. +0.0 -0.6 -0.1
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.1 N.D. -0.3 -0.6 +0.1
anaerobic Nitrate reduction with yeast extract -0.5 N.D. -0.1 +0.8 -0.8
nitrogen source D-Serine (N) +0.1 N.D. +0.1 -0.0 -0.6
carbon source D-Alanine (C) -0.1 N.D. +0.1 +0.1 -0.6
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.4 N.D. -0.3 -0.6 +0.0
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.3 N.D. -0.2 -0.4 -0.2
motility outer cut, LB soft agar motility assay +0.0 N.D. -0.2 -0.7 +0.5
carbon source D-Xylose (C) +0.1 N.D. -0.0 -0.6 +0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.3 N.D. +0.2 +0.0 -0.3
carbon source D-Galactose (C) +0.1 N.D. -0.2 -0.3 +0.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.3 N.D. +0.3 -0.2 -0.2
stress acetate 40 mM -0.2 N.D. +0.1 +0.5 -0.2
carbon source m-Inositol (C) +0.1 N.D. +0.2 +0.3 -0.3
pH Minimal media pH9 -0.2 N.D. +0.2 -0.2 +0.4
stress syringaldehyde 10 mM +0.3 N.D. +0.1 +0.4 -0.1
carbon source Putrescine (C) +0.0 N.D. +0.1 +0.7 -0.1
stress Thallium(I) acetate 0.008 mg/ml -0.3 N.D. +1.0 -0.1 +0.2
carbon source NAG (C) +0.3 N.D. +0.2 +0.4 -0.1
motility outer cut, LB soft agar motility assay +0.4 N.D. -0.1 +0.2 +0.3
nitrogen source Urea (N) -0.2 N.D. -0.1 +1.0 +0.2
carbon source D-Galactose (C) +0.2 N.D. +0.1 +0.3 +0.3
stress Chlorite 0.08 mM -0.1 N.D. +0.7 +0.4 -0.1
stress Thallium(I) acetate 0.008 mg/ml -0.0 N.D. +0.7 +0.3 +0.2
stress Chlorite 0.04 mM +0.1 N.D. +0.5 +0.7 +0.1
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