Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_18165 and AO356_18170 are separated by 238 nucleotidesAO356_18170 and AO356_18175 are separated by 10 nucleotidesAO356_18175 and AO356_18180 are separated by 467 nucleotidesAO356_18180 and AO356_18185 are separated by 219 nucleotides AO356_18165: AO356_18165 - serine dehydratase, at 4,092,480 to 4,093,856 _18165 AO356_18170: AO356_18170 - glycine dehydrogenase, at 4,094,095 to 4,096,944 _18170 AO356_18175: AO356_18175 - glycine cleavage system protein H, at 4,096,955 to 4,097,338 _18175 AO356_18180: AO356_18180 - Fis family transcriptional regulator, at 4,097,806 to 4,099,314 _18180 AO356_18185: AO356_18185 - LysR family transcriptional regulator, at 4,099,534 to 4,100,439 _18185
Group Condition AO356_18165 AO356_18170 AO356_18175 AO356_18180 AO356_18185
nitrogen source Gly-Glu (N) -1.3 -4.0 -1.3 -1.8 -0.1
stress copper (II) chloride 2.5 mM -0.7 -0.7 -0.1 -0.5 +0.1
pH Minimal media pH9 +0.2 -1.3 -0.3 -0.5 -0.0
nitrogen source D-Serine (N) -0.7 -0.5 +0.5 -0.1 -0.1
nitrogen source L-Phenylalanine (N) -0.1 -0.6 -0.0 +0.1 -0.0
stress Cholin acetate 40 mM -0.2 -0.1 +0.1 +0.2 -0.3
survival 4C survival; 1152 hrs +0.2 -0.3 +0.0 -0.2 +0.1
pH Minimal media pH6 +0.2 -0.5 +0.1 -0.0 +0.1
motility outer cut, LB soft agar motility assay -0.3 -0.3 +0.3 +0.3 +0.0
anaerobic Nitrate reduction with yeast extract +0.2 -0.4 +0.0 +0.0 +0.2
carbon source acetate (C) +0.1 -0.4 +0.0 +0.4 -0.1
stress Benzalkonium Chloride 0.016 mg/ml +0.2 -0.0 +0.2 +0.1 -0.3
motility outer cut, LB soft agar motility assay +0.0 +0.3 +0.3 -0.1 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.3 -0.3 -0.0 +0.2
stress Nickel (II) chloride 0.625 mM +0.3 +0.2 -0.1 +0.4 -0.2
stress Choline chloride 500 mM +0.2 +0.2 -0.1 +0.2 +0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.0 -0.1 +0.4 +0.0 +0.3
carbon source L-Histidine (C) +0.7 -0.3 -0.1 +0.3 +0.1
stress Cisplatin 0.0032 mg/ml +0.0 +0.4 +0.1 +0.3 -0.1
carbon source L-Lysine (C) +0.5 +0.1 +0.1 -0.0 +0.2
carbon source L-Alanine (C) +0.3 +0.3 +0.2 +0.1 -0.0
carbon source D-Xylose (C) +0.2 +0.6 -0.1 +0.1 +0.1
carbon source L-Lysine (C) +0.6 -0.0 +0.3 +0.2 +0.0
motility outer cut, LB soft agar motility assay +0.2 +0.4 +0.0 +0.2 +0.4
carbon source L-Histidine (C) +0.8 -0.3 +0.2 +0.2 +0.3
carbon source D-Xylose (C) +0.4 +0.5 +0.0 +0.4 +0.0
stress Nickel (II) chloride 0.625 mM +0.6 +0.5 -0.0 +0.5 -0.0
stress Cobalt chloride 0.08 mM +0.8 +0.4 +0.1 +0.6 -0.2
stress KB-half, Pseudo5 supernatant +0.3 +0.7 -0.0 +0.5 +0.2
stress Cobalt chloride 0.08 mM +0.7 +0.5 +0.2 +0.6 -0.1
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