Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_17700 and AO356_17705 are separated by 42 nucleotidesAO356_17705 and AO356_17710 overlap by 4 nucleotidesAO356_17710 and AO356_17715 are separated by 226 nucleotidesAO356_17715 and AO356_17720 are separated by 207 nucleotides AO356_17700: AO356_17700 - cytochrome B6, at 3,992,217 to 3,993,176 _17700 AO356_17705: AO356_17705 - diguanylate cyclase, at 3,993,219 to 3,995,093 _17705 AO356_17710: AO356_17710 - diguanylate cyclase, at 3,995,090 to 3,997,381 _17710 AO356_17715: AO356_17715 - chemotaxis protein CheY, at 3,997,608 to 3,998,975 _17715 AO356_17720: AO356_17720 - DNA mismatch repair protein MutT, at 3,999,183 to 3,999,599 _17720
Group Condition AO356_17700 AO356_17705 AO356_17710 AO356_17715 AO356_17720
carbon source L-Lysine (C) -0.1 -0.2 -0.4 -0.6 -0.5
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 -0.6 -0.5 -0.5 +0.4
carbon source L-Lysine (C) -0.4 -0.2 -0.2 -0.5 -0.3
carbon source Glycerol (C) -0.2 -0.3 -0.2 -0.2 -0.4
carbon source D-Ribose (C) +0.1 -0.3 -0.2 -0.5 -0.3
carbon source D-Xylose (C) +0.1 -0.4 -0.2 -0.2 -0.4
carbon source L-Arabinose (C) +0.2 -0.7 -0.4 -0.2 -0.0
carbon source D-Lactate (C) +0.0 -0.4 -0.3 -0.2 -0.0
carbon source D-Fructose (C) +0.1 -0.5 -0.2 -0.2 -0.2
nitrogen source Inosine (N) +0.1 -0.4 -0.4 -0.1 -0.1
nitrogen source Gly-Glu (N) -0.0 -0.2 -0.1 +0.1 -0.7
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.5 +0.1 +0.1 -0.2 -0.3
stress copper (II) chloride 2.5 mM -0.2 +0.1 -0.0 +0.4 -1.1
carbon source D-Gluconic Acid (C) +0.4 -0.5 -0.4 -0.1 -0.1
carbon source acetate (C) +0.2 -0.5 -0.2 +0.1 -0.3
carbon source D-Galactose (C) +0.2 -0.2 -0.2 -0.4 +0.0
carbon source pyruvate (C) +0.1 -0.4 -0.4 -0.1 +0.2
nitrogen source Thymine (N) +0.0 -0.4 -0.3 +0.2 +0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.3 +0.2 +0.0 -0.4 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.2 +0.5 +0.4 -0.7
pH Minimal media pH8 -0.1 +0.4 +0.3 +0.0 -0.3
motility outer cut, LB soft agar motility assay +0.2 -0.5 +0.4 +0.8 -0.3
pH Minimal media pH8 -0.3 +0.6 +0.4 +0.1 -0.0
survival 4C survival; 672 hrs -0.1 +0.4 +0.3 -0.2 +0.4
survival 4C survival; 1152 hrs +0.0 +0.7 +0.7 -0.2 -0.2
motility outer cut, LB soft agar motility assay +0.0 +0.1 +0.3 +0.4 +0.4
anaerobic Nitrate reduction with yeast extract -0.1 +0.2 +0.5 +0.3 +0.5
motility outer cut, LB soft agar motility assay -0.1 +0.1 +0.6 +1.0 +0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.5 +0.1 +0.1 +0.0 +1.6
stress KB-half, Pseudo5 supernatant +0.2 +0.2 +0.1 +0.1 +1.8
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