Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_16355 and AO356_16360 are separated by 94 nucleotidesAO356_16360 and AO356_16365 overlap by 4 nucleotidesAO356_16365 and AO356_16370 overlap by 14 nucleotidesAO356_16370 and AO356_16375 are separated by 48 nucleotides AO356_16355: AO356_16355 - hypothetical protein, at 3,697,026 to 3,698,300 _16355 AO356_16360: AO356_16360 - hypothetical protein, at 3,698,395 to 3,698,682 _16360 AO356_16365: AO356_16365 - hypothetical protein, at 3,698,679 to 3,699,377 _16365 AO356_16370: AO356_16370 - hypothetical protein, at 3,699,364 to 3,700,089 _16370 AO356_16375: AO356_16375 - hypothetical protein, at 3,700,138 to 3,701,064 _16375
Group Condition AO356_16355 AO356_16360 AO356_16365 AO356_16370 AO356_16375
pH Minimal media pH6 +0.1 +0.2 -0.0 -1.6 -0.9
pH Minimal media pH6 +0.1 +0.3 +0.1 -1.2 -0.5
survival 4C survival; 360 hrs +0.0 +0.0 -0.2 +0.0 -0.5
stress KB-half, Pseudo5 supernatant -0.3 -0.2 +0.1 +0.0 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +0.2 -0.3 -0.1 -0.3
stress nitrite 10 mM +0.2 +0.0 +0.0 -0.1 -0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.4 -0.1 -0.1 +0.3 +0.1
stress perchlorate 75 mM -0.2 +0.1 -0.1 -0.1 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.0 -0.4 +0.1 +0.1 +0.1
stress Cholin acetate 20 mM -0.1 +0.2 +0.1 +0.1 -0.3
nitrogen source Ammonium chloride (N) -0.0 +0.1 -0.1 -0.1 +0.4
carbon source Carbon source D-Mannitol 2.5 mM -0.0 +0.1 -0.0 -0.2 +0.4
pH Minimal media pH9 +0.0 +0.1 +0.1 +0.2 -0.3
stress Choline chloride 500 mM -0.2 +0.2 +0.1 +0.1 +0.1
stress Sisomicin 0.001 mg/ml -0.0 -0.1 +0.1 +0.4 -0.1
stress copper (II) chloride 2.5 mM +0.1 -0.3 +0.0 +0.1 +0.4
stress Chlorite 0.08 mM -0.1 +0.0 +0.2 +0.1 +0.3
carbon source D,L-Lactate (C) -0.1 +0.1 +0.1 +0.1 +0.3
stress Chlorite 0.04 mM +0.2 -0.1 +0.3 +0.1 +0.1
nitrogen source Carnitine Hydrochloride (N) +0.0 +0.1 -0.1 +0.2 +0.3
carbon source acetate (C) -0.1 +0.0 -0.0 -0.0 +0.6
anaerobic Nitrate reduction with yeast extract +0.1 +0.3 -0.0 -0.3 +0.4
nitrogen source D-Serine (N) -0.1 +0.1 -0.0 +0.4 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.3 -0.2 +0.4 -0.2
carbon source L-Malic (C) -0.1 +0.0 +0.1 +0.2 +0.3
stress Thallium(I) acetate 0.008 mg/ml +0.2 +0.0 +0.1 +0.3 +0.0
carbon source m-Inositol (C) +0.1 +0.0 +0.1 +0.2 +0.3
stress methylglyoxal 0.016 vol% +0.2 -0.1 +0.1 +0.3 +0.2
motility outer cut, LB soft agar motility assay -0.0 -0.0 +0.2 +0.3 +0.4
motility outer cut, LB soft agar motility assay -0.1 +0.1 -0.2 +0.3 +0.8
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