Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_16005 and AO356_16010 are separated by 1 nucleotidesAO356_16010 and AO356_16015 are separated by 2 nucleotidesAO356_16015 and AO356_16020 are separated by 223 nucleotidesAO356_16020 and AO356_16025 are separated by 268 nucleotides AO356_16005: AO356_16005 - methyltransferase, at 3,617,233 to 3,618,102 _16005 AO356_16010: AO356_16010 - type II secretion system protein F, at 3,618,104 to 3,619,321 _16010 AO356_16015: AO356_16015 - general secretion pathway protein GspE, at 3,619,324 to 3,621,033 _16015 AO356_16020: AO356_16020 - fimbrial protein, at 3,621,257 to 3,621,667 _16020 AO356_16025: AO356_16025 - phospholipid-binding protein, at 3,621,936 to 3,622,289 _16025
Group Condition AO356_16005 AO356_16010 AO356_16015 AO356_16020 AO356_16025
nitrogen source Gly-Glu (N) -2.6 -0.2 -0.3 -0.6 -0.1
survival 4C survival; 360 hrs -1.1 +0.1 -0.0 -0.1 -0.0
motility outer cut, LB soft agar motility assay -0.4 -0.2 -0.3 -0.1 -0.1
motility outer cut, LB soft agar motility assay -0.6 -0.2 -0.1 -0.0 -0.2
stress Choline chloride 500 mM -0.3 -0.0 -0.1 +0.1 -0.6
nitrogen source L-Isoleucine (N) -0.5 -0.0 -0.0 -0.0 -0.3
carbon source L-Lysine (C) -0.4 +0.1 -0.2 -0.3 -0.1
carbon source Carbon source Sucrose 5 mM -0.2 -0.2 -0.1 -0.2 -0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.3 -0.1 -0.0 -0.6 +0.1
carbon source L-Lactate (C) -0.5 +0.1 -0.2 -0.1 -0.2
carbon source Fumarate (C) -0.2 -0.1 -0.1 -0.1 -0.4
carbon source Carbon source D-Glucose 10 mM -0.8 -0.1 +0.1 -0.1 +0.0
carbon source L-Isoleucine (C) -0.6 -0.1 -0.1 +0.1 +0.0
motility outer cut, LB soft agar motility assay -0.2 +0.2 -0.3 -0.0 -0.4
stress Lomefloxacin 0.0005 mM -0.5 +0.1 -0.3 +0.0 -0.0
carbon source D-Glucose (C) -0.5 -0.0 +0.0 +0.3 -0.2
carbon source L-Proline (C) -0.4 -0.1 -0.1 -0.1 +0.3
stress Nickel (II) chloride 0.625 mM +0.1 +0.2 -0.2 -0.2 -0.2
carbon source L-Histidine (C) -0.5 +0.1 +0.0 -0.3 +0.3
stress Cisplatin 0.0032 mg/ml +0.1 -0.0 -0.2 +0.2 -0.3
carbon source pyruvate (C) -0.3 +0.1 -0.1 +0.2 -0.2
carbon source L-Histidine (C) -0.3 +0.2 +0.0 -0.1 +0.3
stress KB-half, Pseudo5 supernatant -0.6 +0.0 +0.2 +0.2 +0.4
nitrogen source D-Serine (N) +0.3 -0.1 +0.2 +0.2 -0.3
anaerobic Nitrate reduction with yeast extract +0.1 -0.0 -0.1 +0.6 -0.1
lb LB +0.5 +0.1 -0.2 +0.1 +0.2
stress nitrate 200 mM +0.2 +0.1 -0.2 +0.3 +0.2
nitrogen source Inosine (N) +0.4 +0.0 +0.1 +0.2 +0.2
stress nitrite 10 mM +0.2 +0.2 +0.2 +0.1 +0.4
stress methylglyoxal 0.016 vol% +0.7 +0.1 +0.1 +0.4 -0.1
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