Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_15945 and AO356_15950 are separated by 5 nucleotidesAO356_15950 and AO356_15955 are separated by 93 nucleotidesAO356_15955 and AO356_15960 are separated by 146 nucleotidesAO356_15960 and AO356_15965 are separated by 152 nucleotides AO356_15945: AO356_15945 - tRNA-Pro, at 3,610,324 to 3,610,400 _15945 AO356_15950: AO356_15950 - tRNA-Lys, at 3,610,406 to 3,610,481 _15950 AO356_15955: AO356_15955 - tRNA-Pro, at 3,610,575 to 3,610,651 _15955 AO356_15960: AO356_15960 - chemotaxis protein, at 3,610,798 to 3,612,423 _15960 AO356_15965: AO356_15965 - NADH dehydrogenase, at 3,612,576 to 3,613,874 _15965
Group Condition AO356_15945 AO356_15950 AO356_15955 AO356_15960 AO356_15965
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. N.D. N.D. +0.1 -1.2
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine N.D. N.D. N.D. -0.4 -0.2
carbon source Carbon source D-Glucose 10 mM N.D. N.D. N.D. -0.5 -0.2
stress copper (II) chloride 2.5 mM N.D. N.D. N.D. -0.8 +0.2
nitrogen source Adenosine (N) N.D. N.D. N.D. -0.3 -0.2
stress Cholin acetate 40 mM N.D. N.D. N.D. -0.1 -0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. N.D. N.D. -0.4 -0.1
carbon source D-Xylose (C) N.D. N.D. N.D. -0.5 +0.1
carbon source L-Malic (C) N.D. N.D. N.D. -0.5 +0.1
pH Minimal media pH8 N.D. N.D. N.D. -0.3 -0.1
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine N.D. N.D. N.D. -0.1 -0.3
carbon source D-Fructose (C) N.D. N.D. N.D. -0.4 +0.1
anaerobic Nitrate reduction with yeast extract N.D. N.D. N.D. -0.5 +0.1
stress Thallium(I) acetate 0.008 mg/ml N.D. N.D. N.D. -0.4 +0.1
stress Paraquat dichloride 0.0625 mg/ml N.D. N.D. N.D. -0.3 +0.1
stress D-Cycloserine 0.1 mg/ml N.D. N.D. N.D. -0.3 +0.1
motility outer cut, LB soft agar motility assay N.D. N.D. N.D. -0.4 +0.1
carbon source D-Mannose (C) N.D. N.D. N.D. -0.2 +0.2
pH Minimal media pH6 N.D. N.D. N.D. +0.3 -0.1
stress Nickel (II) chloride 0.625 mM N.D. N.D. N.D. +0.4 -0.0
carbon source L-Isoleucine (C) N.D. N.D. N.D. +0.4 -0.0
stress Cobalt chloride 0.08 mM N.D. N.D. N.D. +0.2 +0.2
carbon source L-Lysine (C) N.D. N.D. N.D. +0.3 +0.1
stress Benzalkonium Chloride 0.016 mg/ml N.D. N.D. N.D. +0.1 +0.3
nitrogen source D-Serine (N) N.D. N.D. N.D. +0.3 +0.1
survival 4C survival; 360 hrs N.D. N.D. N.D. +0.3 +0.1
stress Chlorite 0.08 mM N.D. N.D. N.D. +0.4 +0.1
stress Vanillin 2.5 mM N.D. N.D. N.D. +0.4 +0.2
survival 4C survival; 1152 hrs N.D. N.D. N.D. +0.6 +0.0
motility outer cut, LB soft agar motility assay N.D. N.D. N.D. +0.4 +0.2
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