Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_15900 and AO356_15905 are separated by 163 nucleotidesAO356_15905 and AO356_15910 overlap by 4 nucleotidesAO356_15910 and AO356_15915 overlap by 11 nucleotidesAO356_15915 and AO356_15920 are separated by 125 nucleotides AO356_15900: AO356_15900 - hypothetical protein, at 3,600,733 to 3,600,951 _15900 AO356_15905: AO356_15905 - transcriptional regulator, at 3,601,115 to 3,602,461 _15905 AO356_15910: AO356_15910 - histidine kinase, at 3,602,458 to 3,604,047 _15910 AO356_15915: AO356_15915 - hypothetical protein, at 3,604,037 to 3,604,270 _15915 AO356_15920: AO356_15920 - DNA transporter, at 3,604,396 to 3,605,412 _15920
Group Condition AO356_15900 AO356_15905 AO356_15910 AO356_15915 AO356_15920
stress copper (II) chloride 2.5 mM -0.4 +0.2 -0.2 -3.7 -1.5
stress perchlorate 75 mM +0.4 -0.1 +0.1 -0.3 -2.5
motility outer cut, LB soft agar motility assay +0.5 -0.3 -0.0 -0.0 -2.3
carbon source Ethanol (C) -0.6 +0.1 +0.0 +0.0 -1.5
stress Chlorite 0.04 mM -0.3 -0.1 -0.3 -0.6 -0.6
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.1 -0.1 -0.2 -0.1 -1.5
stress methylglyoxal 0.016 vol% -0.1 +0.0 -0.2 -0.5 -0.9
stress Spectinomycin 0.0125 mg/ml -0.1 +0.0 -0.0 -0.2 -1.4
lb LB -0.1 +0.1 -0.0 -0.3 -1.2
carbon source Tween 20 (C) -0.3 -0.1 +0.1 -0.3 -0.7
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.4 -0.2 +0.1 -0.9 +0.1
survival 4C survival; 192 hrs -0.1 +0.1 +0.0 -0.1 -1.3
motility outer cut, LB soft agar motility assay -0.1 -0.4 +0.3 +0.1 -1.2
carbon source L-Arginine (C) -0.3 +0.1 -0.0 -0.3 -0.8
stress Aluminum chloride 5 mM +0.3 +0.2 -0.1 -0.0 -1.7
nitrogen source Putrescine (N) -0.1 -0.0 -0.3 +0.2 -1.0
survival 4C survival; 1152 hrs -0.3 +0.2 +0.2 +0.2 -1.4
carbon source L-Lysine (C) -0.1 -0.3 -0.3 +0.3 -0.6
survival 4C survival; 672 hrs -0.0 +0.2 +0.4 -0.2 -1.2
carbon source D-Trehalose (C) -0.3 +0.2 +0.2 -0.3 -0.7
stress nitrite 10 mM +0.4 +0.2 -0.1 -0.3 -1.1
pH Minimal media pH9 +0.1 -0.2 +0.0 +0.4 -1.2
pH Minimal media pH6 +0.2 -0.0 +0.0 +0.3 -1.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM -1.0 +0.0 +0.0 -0.5 +0.8
stress Benzalkonium Chloride 0.016 mg/ml +0.1 -0.5 -0.5 -0.8 +1.1
carbon source D-Fructose (C) -0.6 -0.1 +0.3 +0.2 -0.3
stress Doxycycline hyclate 0.0001 mg/ml +0.5 -0.2 +0.1 -0.2 -0.7
stress nitrate 200 mM +0.3 +0.3 +0.1 -0.3 -0.6
motility outer cut, LB soft agar motility assay +0.7 -0.1 -0.5 +0.3 -0.3
stress Thallium(I) acetate 0.008 mg/ml +0.2 +0.0 +0.3 -0.1 +0.9
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