Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_15575 and AO356_15580 are separated by 271 nucleotidesAO356_15580 and AO356_15585 are separated by 103 nucleotidesAO356_15585 and AO356_15590 are separated by 165 nucleotidesAO356_15590 and AO356_15595 overlap by 1 nucleotides AO356_15575: AO356_15575 - hypothetical protein, at 3,524,583 to 3,525,920 _15575 AO356_15580: AO356_15580 - 4-hydroxyphenylpyruvate dioxygenase, at 3,526,192 to 3,528,093 _15580 AO356_15585: AO356_15585 - TetR family transcriptional regulator, at 3,528,197 to 3,528,874 _15585 AO356_15590: AO356_15590 - shikimate dehydrogenase, at 3,529,040 to 3,529,897 _15590 AO356_15595: AO356_15595 - 3-dehydroquinate dehydratase, at 3,529,897 to 3,530,337 _15595
Group Condition AO356_15575 AO356_15580 AO356_15585 AO356_15590 AO356_15595
stress Sisomicin 0.001 mg/ml +0.0 -0.1 -0.1 -0.7 -0.1
stress Nickel (II) chloride 0.625 mM -0.1 -0.0 -0.1 -0.5 -0.2
stress Benzalkonium Chloride 0.016 mg/ml +0.0 -0.2 -0.0 -0.2 -0.4
carbon source Carbon source Sucrose 2.5 mM -0.0 +0.1 -0.0 -0.7 -0.1
carbon source L-Histidine (C) -0.1 -0.1 -0.3 -0.4 +0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.0 +0.0 -0.4 -0.4 +0.1
carbon source L-Glutamic (C) +0.1 +0.0 +0.0 -0.4 -0.3
carbon source acetate (C) +0.0 +0.1 +0.1 -0.7 +0.1
carbon source L-Histidine (C) +0.0 +0.0 -0.3 -0.3 +0.4
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.1 +0.1 -0.4 -0.1
nitrogen source D-Serine (N) -0.0 -0.2 -0.1 +0.5 -0.1
motility outer cut, LB soft agar motility assay -0.2 +0.2 -0.3 +0.0 +0.4
stress Chloramphenicol 0.005 mg/ml -0.0 -0.1 -0.1 +0.5 -0.1
stress copper (II) chloride 2.5 mM +0.0 -0.0 -0.0 +0.8 -0.6
stress Cisplatin 0.0032 mg/ml +0.0 -0.1 -0.2 +0.6 -0.1
stress Benzalkonium Chloride 0.008 mg/ml -0.0 +0.1 -0.2 +0.5 -0.1
anaerobic Nitrate reduction with yeast extract +0.2 -0.2 +0.2 +0.4 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +0.0 -0.3 +0.4 +0.4
stress nitrite 10 mM +0.1 -0.0 +0.0 +0.5 -0.3
stress Thallium(I) acetate 0.008 mg/ml +0.1 +0.0 +0.0 +0.6 -0.3
carbon source NAG (C) +0.2 +0.1 +0.1 +0.4 -0.2
carbon source Carbon source D-Mannitol 10 mM -0.1 +0.2 -0.0 +0.4 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 -0.1 +0.1 +0.3 +0.2
stress Rifampicin 0.0024 mg/ml +0.2 +0.1 -0.1 +0.5 -0.1
carbon source L-Lysine (C) +0.0 -0.0 +0.1 +0.3 +0.4
carbon source Carbon source Sucrose 5 mM +0.0 +0.0 +0.1 +0.6 +0.2
stress Ceftazidime 0.2 mg/ml -0.1 -0.0 +0.1 +1.0 -0.0
stress Paraquat dichloride 0.0625 mg/ml +0.0 +0.1 +0.0 +0.6 +0.3
survival 4C survival; 360 hrs +0.1 +0.1 +0.1 +0.7 -0.0
motility outer cut, LB soft agar motility assay +0.2 +0.1 +0.2 +0.5 +0.2
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