Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_15000 and AO356_15005 are separated by 486 nucleotidesAO356_15005 and AO356_15010 are separated by 35 nucleotidesAO356_15010 and AO356_15015 overlap by 16 nucleotidesAO356_15015 and AO356_15020 are separated by 11 nucleotides AO356_15000: AO356_15000 - exodeoxyribonuclease VII small subunit, at 3,391,572 to 3,391,814 _15000 AO356_15005: AO356_15005 - hypothetical protein, at 3,392,301 to 3,393,089 _15005 AO356_15010: AO356_15010 - hypothetical protein, at 3,393,125 to 3,394,834 _15010 AO356_15015: AO356_15015 - hypothetical protein, at 3,394,819 to 3,395,478 _15015 AO356_15020: AO356_15020 - hypothetical protein, at 3,395,490 to 3,400,043 _15020
Group Condition AO356_15000 AO356_15005 AO356_15010 AO356_15015 AO356_15020
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. -0.6 -0.5 -0.1 -0.0
stress perchlorate 75 mM N.D. -0.3 +0.1 -0.3 -0.1
carbon source L-Leucine (C) N.D. -0.1 -0.1 -0.2 -0.2
carbon source acetate (C) N.D. -0.2 -0.3 +0.0 -0.0
stress Nalidixic 0.004 mg/ml N.D. -0.0 +0.1 -0.2 -0.2
stress Doxycycline hyclate 0.0001 mg/ml N.D. -0.2 -0.2 -0.1 +0.1
stress KB-half, Pseudo5 supernatant N.D. -0.3 -0.1 +0.1 +0.0
stress copper (II) chloride 2.5 mM N.D. -0.3 -0.0 +0.1 -0.1
carbon source L-Lactate (C) N.D. -0.2 -0.3 +0.2 -0.0
stress Chlorite 0.04 mM N.D. +0.2 -0.3 -0.2 +0.1
anaerobic Nitrate reduction with yeast extract N.D. -0.2 +0.3 -0.1 -0.3
motility outer cut, LB soft agar motility assay N.D. +0.3 -0.4 -0.0 +0.0
stress nitrite 10 mM N.D. +0.2 -0.2 -0.2 +0.0
stress Chlorite 0.08 mM N.D. +0.2 -0.0 -0.1 -0.1
stress Ceftazidime 0.2 mg/ml N.D. +0.2 -0.2 -0.0 +0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. +0.2 +0.3 -0.5 +0.1
pH Minimal media pH6 N.D. -0.2 -0.1 +0.2 +0.1
stress nitrate 200 mM N.D. -0.1 +0.3 -0.1 -0.1
motility outer cut, LB soft agar motility assay N.D. +0.2 -0.2 +0.1 -0.1
carbon source D,L-Lactate (C) N.D. -0.2 -0.0 +0.3 +0.0
stress acetate 40 mM N.D. +0.1 +0.2 -0.2 +0.0
stress Paraquat dichloride 0.0625 mg/ml N.D. -0.1 +0.1 +0.2 +0.0
survival 4C survival; 360 hrs N.D. +0.0 -0.3 +0.3 +0.2
carbon source Carbon source Sucrose 10 mM N.D. +0.1 -0.2 +0.3 +0.0
carbon source Carbon source D,L-Lactate 10 mM N.D. +0.1 +0.1 -0.1 +0.1
stress Benzalkonium Chloride 0.016 mg/ml N.D. +0.3 -0.0 +0.1 -0.2
stress sodium fluoride 6.25 mM N.D. +0.1 +0.2 +0.1 -0.0
carbon source Carbon source Sucrose 5 mM N.D. +0.1 +0.2 +0.2 +0.0
pH Minimal media pH9 N.D. +0.1 +0.1 +0.1 +0.1
carbon source Carbon source Sucrose 2.5 mM N.D. +0.3 +0.2 +0.1 +0.0
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