Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_14885 and AO356_14890 are separated by 11 nucleotidesAO356_14890 and AO356_14895 are separated by 1 nucleotidesAO356_14895 and AO356_14900 are separated by 157 nucleotidesAO356_14900 and AO356_14905 are separated by 120 nucleotides AO356_14885: AO356_14885 - hypothetical protein, at 3,371,576 to 3,372,094 _14885 AO356_14890: AO356_14890 - peptide ABC transporter permease, at 3,372,106 to 3,373,371 _14890 AO356_14895: AO356_14895 - methionine ABC transporter ATP-binding protein, at 3,373,373 to 3,374,083 _14895 AO356_14900: AO356_14900 - zinc-binding protein, at 3,374,241 to 3,374,828 _14900 AO356_14905: AO356_14905 - hypothetical protein, at 3,374,949 to 3,375,299 _14905
Group Condition AO356_14885 AO356_14890 AO356_14895 AO356_14900 AO356_14905
stress Sisomicin 0.001 mg/ml -0.1 -0.4 -0.2 -0.3 -0.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 +0.3 -0.8 -0.2 -0.8
temperature LB 30C -0.2 +0.0 -0.0 -0.4 -0.5
stress Chlorite 0.08 mM -0.2 +0.0 -0.2 -0.9 +0.2
carbon source L-Lysine (C) +0.0 -0.0 +0.3 -0.7 -0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 +0.3 -0.3 -0.1 -0.6
pH Minimal media pH8 +0.2 +0.0 +0.3 -0.6 -0.4
stress Choline chloride 500 mM -0.2 +0.2 -0.5 +0.6 -0.6
carbon source a-Ketoglutaric (C) +0.3 -0.1 +0.1 -0.4 -0.3
carbon source D-Xylose (C) +0.3 +0.0 +0.1 -0.6 -0.2
motility outer cut, LB soft agar motility assay +0.1 +0.4 +0.0 -0.5 -0.4
motility outer cut, LB soft agar motility assay -0.4 +0.0 -0.7 +0.4 +0.5
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.3 +0.3 +0.1 -0.5 -0.2
carbon source Carbon source Sucrose 10 mM -0.1 -0.2 -0.4 +0.1 +0.5
stress KB-half, Pseudo5 supernatant +0.6 +0.1 +0.1 -0.7 -0.2
stress perchlorate 75 mM -0.1 +0.4 +0.3 -0.6 +0.1
carbon source L-Lysine (C) +0.2 +0.2 -0.2 -0.2 +0.4
carbon source L-Aspartic Acid (C) -0.2 +0.2 -0.2 +0.4 +0.2
carbon source L-Histidine (C) +0.2 +0.1 +0.5 -0.3 +0.2
nitrogen source nitrite (N) +0.0 +0.0 -0.3 +0.5 +0.5
carbon source L-Histidine (C) +0.0 +0.1 +0.3 -0.4 +0.7
anaerobic Nitrate reduction with yeast extract +0.2 -0.1 +0.6 -0.6 +0.8
carbon source L-Aspartic Acid (C) -0.1 +0.2 +0.0 +0.3 +0.6
carbon source Glycerol (C) +0.1 +0.3 +0.0 +0.5 +0.3
motility outer cut, LB soft agar motility assay +0.3 +0.4 -0.3 +0.1 +0.7
carbon source L-Malic (C) +0.0 +0.2 +0.3 +0.1 +0.6
carbon source L-Glutamic (C) +0.1 +0.3 +0.4 +0.2 +0.3
nitrogen source Adenosine (N) +0.3 +0.2 +0.2 +0.4 +0.5
carbon source L-Arginine (C) +0.2 +0.1 +0.7 +0.2 +0.4
carbon source L-Glutamine (C) +0.3 +0.1 +0.4 +0.3 +0.5
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