Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_14210 and AO356_14215 are separated by 202 nucleotidesAO356_14215 and AO356_14220 are separated by 325 nucleotidesAO356_14220 and AO356_14225 are separated by 62 nucleotidesAO356_14225 and AO356_14230 are separated by 12 nucleotides AO356_14210: AO356_14210 - pyrroloquinoline quinone biosynthesis protein PqqC, at 3,227,833 to 3,228,585 _14210 AO356_14215: AO356_14215 - pyrroloquinoline quinone biosynthesis protein PqqB, at 3,228,788 to 3,229,699 _14215 AO356_14220: AO356_14220 - pyrroloquinoline quinone biosynthesis protein PqqF, at 3,230,025 to 3,232,457 _14220 AO356_14225: AO356_14225 - 5-aminopentanamidase (EC 3.5.1.30) (from data), at 3,232,520 to 3,233,314 _14225 AO356_14230: AO356_14230 - lysine 2-monooxygenase (EC 1.13.12.2) (from data), at 3,233,327 to 3,235,009 _14230
Group Condition AO356_14210 AO356_14215 AO356_14220 AO356_14225 AO356_14230
carbon source L-Lysine (C) +0.0 -0.5 -0.4 -3.5 -4.7
carbon source L-Lysine (C) +0.2 -0.1 -0.4 -3.4 -5.0
carbon source Ethanol (C) -1.0 -1.0 -3.3 -0.1 -0.1
carbon source Ethanol (C) -1.0 -1.0 -2.8 +0.0 +0.1
carbon source D-Glucosamine Hydrochloride (C) -0.3 -0.5 -1.9 +0.3 +0.0
carbon source Uridine (C) -0.5 -0.7 -1.2 +0.0 +0.1
carbon source NAG (C) -0.1 +0.0 -1.3 +0.0 -0.0
carbon source Cytidine (C) -0.4 -0.2 -0.8 +0.1 -0.0
anaerobic Nitrate reduction with yeast extract -0.1 -0.9 -0.1 -0.2 +0.1
carbon source Inosine (C) -0.3 -0.4 -0.5 +0.2 -0.1
carbon source Carnitine Hydrochloride (C) -0.2 -0.5 -0.4 -0.1 +0.1
carbon source L-Histidine (C) -0.3 -0.3 -0.7 -0.1 +0.4
carbon source L-Arginine (C) -0.1 -0.0 -0.8 -0.2 +0.1
stress sodium fluoride 6.25 mM -0.3 -0.4 -0.1 -0.2 -0.0
nitrogen source Adenosine (N) -0.1 -0.2 -0.3 -0.3 -0.1
carbon source L-Arginine (C) -0.0 -0.2 -0.6 -0.1 -0.0
carbon source L-Aspartic Acid (C) -0.2 -0.5 -0.1 -0.1 +0.1
carbon source acetate (C) +0.0 +0.3 -0.3 -0.2 -0.6
nitrogen source nitrite (N) -0.3 -0.3 -0.3 +0.1 +0.0
survival 4C survival; 1152 hrs -0.2 -0.4 -0.0 -0.3 +0.3
carbon source D-Xylose (C) -0.2 +0.1 -0.6 +0.1 +0.1
carbon source L-Histidine (C) -0.0 -0.1 -0.8 -0.1 +0.4
carbon source acetate (C) +0.2 +0.3 -0.2 -0.3 -0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.2 -0.6 -0.2 +0.1 +0.1
survival 4C survival; 360 hrs +0.0 -0.6 +0.0 -0.0 +0.3
stress Chlorite 0.04 mM +0.3 -0.4 +0.1 -0.2 -0.0
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.2 +0.3 -0.2 +0.2 +0.1
nitrogen source L-tyrosine (N) +0.2 +0.4 -0.1 +0.3 +0.0
carbon source Putrescine (C) +0.3 +0.2 +0.7 -0.1 -0.1
stress copper (II) chloride 2.5 mM +0.4 +0.1 -0.0 +0.5 +0.6
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