Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_14150 and AO356_14155 overlap by 4 nucleotidesAO356_14155 and AO356_14160 are separated by 119 nucleotidesAO356_14160 and AO356_14165 are separated by 276 nucleotidesAO356_14165 and AO356_14170 are separated by 481 nucleotides AO356_14150: AO356_14150 - malonyl-[acyl-carrier protein] O-methyltransferase BioC, at 3,213,053 to 3,213,865 _14150 AO356_14155: AO356_14155 - dethiobiotin synthetase, at 3,213,862 to 3,214,542 _14155 AO356_14160: AO356_14160 - pyrroloquinoline quinone biosynthesis protein PqqE, at 3,214,662 to 3,214,958 _14160 AO356_14165: AO356_14165 - Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data), at 3,215,235 to 3,217,040 _14165 AO356_14170: AO356_14170 - hypothetical protein, at 3,217,522 to 3,218,013 _14170
Group Condition AO356_14150 AO356_14155 AO356_14160 AO356_14165 AO356_14170
pH Minimal media pH9 -3.3 -2.9 +0.3 -0.6 -0.1
carbon source casaminos (C) -2.8 -2.6 +0.1 -0.0 -0.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM -2.9 -2.4 -0.1 +0.2 +0.2
carbon source acetate (C) -1.7 -1.7 -0.6 -0.2 -0.2
carbon source L-Alanine (C) -1.8 -2.3 +0.2 -0.1 -0.2
carbon source D-Mannose (C) -2.0 -2.0 -0.3 +0.0 -0.1
pH Minimal media pH8 -2.3 -1.9 -0.1 +0.2 -0.1
carbon source Tween 20 (C) -0.3 -0.3 +0.2 -3.8 +0.0
carbon source L-Lysine (C) -0.7 -2.4 -0.8 +0.2 -0.2
pH Minimal media pH7 -1.7 -2.6 +0.2 +0.1 +0.0
nitrogen source L-tyrosine (N) -1.9 -1.7 -0.3 -0.1 +0.2
carbon source Tween 20 (C) -0.3 -0.4 +0.2 -3.5 +0.1
nitrogen source D-Alanine (N) -1.8 -2.2 +0.1 -0.1 +0.1
pH Minimal media pH7 -2.0 -1.8 +0.2 +0.2 -0.1
carbon source acetate (C) -1.3 -1.6 -0.3 -0.3 -0.0
carbon source NAG (C) -1.1 -2.0 -0.1 -0.0 -0.1
carbon source L-Leucine (C) -1.3 -1.8 -0.0 -0.1 -0.1
pH Minimal media pH8 -1.6 -1.8 +0.2 +0.1 +0.0
nitrogen source L-Leucine (N) -1.5 -1.1 -0.0 -0.4 -0.1
nitrogen source Ammonium chloride (N) -1.4 -1.6 -0.1 +0.1 +0.1
nitrogen source Adenosine (N) -1.4 -1.5 +0.1 +0.2 +0.0
nitrogen source Putrescine (N) -1.4 -1.4 -0.0 +0.2 -0.0
carbon source L-Lysine (C) -1.0 -2.1 +0.1 +0.2 +0.2
motility outer cut, LB soft agar motility assay -0.6 -1.2 +0.5 +0.5 -0.1
motility outer cut, LB soft agar motility assay -0.8 -1.0 +0.9 +0.7 +0.3
motility outer cut, LB soft agar motility assay -0.2 -0.9 +1.4 +0.4 -0.2
motility outer cut, LB soft agar motility assay -0.8 -0.7 +1.6 +0.4 +0.2
stress Lomefloxacin 0.0005 mM +1.2 +1.2 -0.6 -0.1 +0.1
nitrogen source D-Serine (N) +0.7 +1.2 -0.3 +1.0 -0.2
stress Benzalkonium Chloride 0.016 mg/ml +1.7 +1.7 +0.6 +1.2 +0.3
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