Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_14030 and AO356_14035 are separated by 70 nucleotidesAO356_14035 and AO356_14040 overlap by 1 nucleotidesAO356_14040 and AO356_14045 are separated by 220 nucleotidesAO356_14045 and AO356_14050 are separated by 197 nucleotides AO356_14030: AO356_14030 - ATP-dependent zinc protease, at 3,184,550 to 3,185,056 _14030 AO356_14035: AO356_14035 - transcriptional regulator, at 3,185,127 to 3,185,807 _14035 AO356_14040: AO356_14040 - histidine kinase, at 3,185,807 to 3,187,225 _14040 AO356_14045: AO356_14045 - hypothetical protein, at 3,187,446 to 3,188,819 _14045 AO356_14050: AO356_14050 - glutathione S-transferase, at 3,189,017 to 3,189,646 _14050
Group Condition AO356_14030 AO356_14035 AO356_14040 AO356_14045 AO356_14050
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +0.0 -0.0 +0.0 -4.3
temperature LB 30C +0.1 +0.0 +0.1 -0.1 -3.0
stress Rifampicin 0.0016 mg/ml -0.0 +0.1 -0.1 +0.1 -2.4
carbon source Glycerol (C) +0.3 +0.1 +0.1 +0.1 -2.6
nitrogen source Gly-Glu (N) +0.2 -0.6 +0.1 +0.0 -1.4
carbon source Ethanol (C) -0.1 -0.3 -0.0 -0.1 -0.9
stress D-Cycloserine 0.1 mg/ml +0.1 +0.1 -0.0 -0.1 -1.6
lb LB -0.0 +0.0 -0.0 +0.1 -1.4
carbon source L-Leucine (C) +0.1 +0.1 -0.1 -0.0 -1.5
pH Minimal media pH6 +0.0 -0.1 +0.0 -0.1 -1.3
carbon source Tween 20 (C) -0.1 +0.1 -0.1 -0.0 -1.2
carbon source casaminos (C) -0.1 +0.3 -0.1 +0.0 -1.3
nitrogen source Inosine (N) -0.1 +0.3 +0.1 +0.0 -1.5
nitrogen source nitrite (N) -0.0 +0.2 -0.0 +0.2 -1.4
stress perchlorate 75 mM -0.3 +0.2 -0.1 -0.1 -0.8
motility outer cut, LB soft agar motility assay -0.0 +0.0 -0.0 +0.3 -1.3
motility outer cut, LB soft agar motility assay +0.1 +0.1 +0.2 +0.4 -1.4
stress Thallium(I) acetate 0.008 mg/ml -0.2 +0.2 +0.1 +0.1 -0.9
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.4 -1.2 -0.1 +0.1 +0.1
stress nitrite 10 mM +0.0 +0.5 +0.3 -0.0 -1.0
motility outer cut, LB soft agar motility assay -0.9 +0.2 +0.0 +0.4 +0.3
anaerobic Nitrate reduction with yeast extract -0.4 -0.9 +0.0 +0.3 +1.1
stress copper (II) chloride 2.5 mM -0.2 -0.1 +0.3 -0.1 +1.0
stress Vanillin 2.5 mM +0.1 +0.2 -0.1 -0.1 +1.0
stress methylglyoxal 0.016 vol% -0.2 +0.2 -0.0 -0.1 +1.3
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.1 +0.5 +0.2 +0.1 +0.6
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.4 +0.4 +0.2 +0.1 +1.1
carbon source Carbon source Sucrose 5 mM -0.0 +0.3 -0.0 +0.0 +1.2
nitrogen source D-Serine (N) +0.0 +0.6 +0.3 +0.2 +0.3
carbon source D-Ribose (C) +0.0 +0.2 +0.1 +0.0 +1.2
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