Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_13920 and AO356_13925 are separated by 320 nucleotidesAO356_13925 and AO356_13930 are separated by 1102 nucleotidesAO356_13930 and AO356_13935 are separated by 162 nucleotidesAO356_13935 and AO356_13940 are separated by 27 nucleotides AO356_13920: AO356_13920 - electron transfer flavoprotein subunit beta, at 3,157,113 to 3,157,883 _13920 AO356_13925: AO356_13925 - acetyltransferase, at 3,158,204 to 3,158,770 _13925 AO356_13930: AO356_13930 - choline dehydrogenase, at 3,159,873 to 3,163,325 _13930 AO356_13935: AO356_13935 - hypothetical protein, at 3,163,488 to 3,165,356 _13935 AO356_13940: AO356_13940 - metallophosphoesterase, at 3,165,384 to 3,166,628 _13940
Group Condition AO356_13920 AO356_13925 AO356_13930 AO356_13935 AO356_13940
carbon source Carnitine Hydrochloride (C) -6.5 -0.0 -0.0 -0.0 +0.0
nitrogen source Carnitine Hydrochloride (N) -3.4 -0.1 +0.1 +0.1 -0.1
carbon source L-Lysine (C) -2.4 +0.2 -0.2 -0.2 +0.1
carbon source L-Lysine (C) -2.7 +0.1 +0.1 +0.2 +0.0
carbon source L-Isoleucine (C) -1.0 +0.0 -0.1 -0.1 -0.1
carbon source L-Histidine (C) -1.1 +0.0 +0.0 +0.0 -0.2
carbon source L-Histidine (C) -1.4 +0.0 +0.0 +0.1 +0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.7 -0.1 +0.0 -0.1 -0.3
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.8 -0.3 -0.1 -0.1 +0.1
carbon source m-Inositol (C) -0.9 -0.0 +0.0 -0.1 -0.0
carbon source D-Lactate (C) -0.7 -0.2 +0.0 -0.0 -0.1
carbon source L-Asparagine (C) -0.9 -0.0 +0.0 +0.0 +0.0
temperature LB 10C -0.6 -0.2 -0.2 +0.1 +0.1
pH Minimal media pH6 -1.1 +0.0 +0.0 +0.1 +0.2
carbon source L-Asparagine (C) -0.7 +0.1 -0.0 +0.1 -0.1
temperature LB 20C -0.7 +0.1 +0.0 +0.1 -0.1
carbon source Carbon source D-Mannitol 10 mM -0.7 +0.0 +0.2 +0.1 -0.1
nitrogen source L-tyrosine (N) -0.8 +0.0 +0.2 -0.0 +0.1
nitrogen source L-Phenylalanine (N) -0.6 -0.2 +0.2 +0.0 +0.1
carbon source Carbon source Sucrose 10 mM -0.6 +0.2 +0.1 +0.0 -0.1
stress Benzalkonium Chloride 0.016 mg/ml -0.7 +0.2 -0.1 +0.0 +0.2
survival 4C survival; 192 hrs -0.5 +0.1 -0.1 +0.2 -0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.5 -0.4 -0.1 -0.0 -0.1
survival 4C survival; 1152 hrs +0.6 -0.1 -0.2 -0.0 -0.3
survival 4C survival; 360 hrs +0.6 -0.3 -0.3 +0.3 -0.1
motility outer cut, LB soft agar motility assay +0.8 -0.2 -0.1 -0.1 -0.1
stress Lomefloxacin 0.0005 mM +0.6 -0.2 -0.0 -0.1 +0.0
motility outer cut, LB soft agar motility assay +0.8 -0.0 -0.1 -0.0 +0.1
stress acetate 40 mM +1.0 -0.2 -0.1 +0.0 +0.1
stress KB-half, Pseudo5 supernatant +0.7 -0.1 +0.0 -0.0 +0.2
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