Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_13780 and AO356_13785 overlap by 1 nucleotidesAO356_13785 and AO356_13790 are separated by 370 nucleotidesAO356_13790 and AO356_13795 are separated by 147 nucleotidesAO356_13795 and AO356_13800 are separated by 79 nucleotides AO356_13780: AO356_13780 - Zn-dependent protease, at 3,125,105 to 3,126,442 _13780 AO356_13785: AO356_13785 - peptidase C69, at 3,126,442 to 3,127,884 _13785 AO356_13790: AO356_13790 - choline dehydrogenase, at 3,128,255 to 3,129,958 _13790 AO356_13795: AO356_13795 - betaine-aldehyde dehydrogenase, at 3,130,106 to 3,131,578 _13795 AO356_13800: AO356_13800 - transcriptional repressor BetI, at 3,131,658 to 3,132,278 _13800
Group Condition AO356_13780 AO356_13785 AO356_13790 AO356_13795 AO356_13800
stress Choline chloride 500 mM -0.1 -0.3 -2.2 -0.5 -0.1
stress Thallium(I) acetate 0.008 mg/ml -0.4 -0.0 -0.6 -0.5 -0.8
stress Thallium(I) acetate 0.008 mg/ml +0.1 +0.1 -0.6 -0.5 -0.7
survival 4C survival; 1152 hrs -0.2 -0.2 -0.3 -0.5 -0.4
stress Choline chloride 300 mM +0.1 -0.1 -1.0 -0.7 +0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.1 +0.3 -0.5 -0.5 -0.7
motility outer cut, LB soft agar motility assay -0.3 +0.1 -0.1 -0.6 -0.3
motility outer cut, LB soft agar motility assay -0.0 -0.0 -0.2 -0.7 -0.3
stress Nalidixic 0.004 mg/ml -0.1 -0.1 -0.2 +0.2 -0.5
survival 4C survival; 360 hrs -0.3 +0.1 +0.1 -0.1 -0.4
carbon source L-Lysine (C) -0.2 -0.1 +0.1 +0.2 -0.6
nitrogen source Urea (N) -0.3 -0.4 -0.1 -0.1 +0.3
stress Sisomicin 0.001 mg/ml -0.0 -0.2 -0.1 -0.4 +0.3
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.0 -0.3 -0.1 +0.3 -0.3
stress Paraquat dichloride 0.0625 mg/ml -0.0 +0.1 -0.0 +0.4 -0.7
stress Paraquat dichloride 0.0625 mg/ml -0.2 -0.0 +0.0 +0.5 -0.5
carbon source L-Lysine (C) +0.1 +0.0 +0.3 +0.1 -0.6
nitrogen source Carnitine Hydrochloride (N) -0.1 +0.0 -0.5 +0.1 +0.5
stress Lomefloxacin 0.0005 mM -0.1 +0.1 -0.5 +0.6 +0.3
stress Chlorite 0.08 mM +0.1 -0.1 -0.3 +0.5 +0.2
carbon source D-Xylose (C) +0.2 +0.3 +0.2 +0.1 -0.3
stress methylglyoxal 0.016 vol% +0.1 +0.0 +0.3 +0.6 -0.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 +0.1 -0.2 +0.5 -0.0
carbon source Carnitine Hydrochloride (C) +0.3 -0.1 -0.8 +0.1 +1.2
anaerobic Nitrate reduction with yeast extract +0.3 +0.5 -0.2 +0.1 +0.1
stress Benzalkonium Chloride 0.016 mg/ml -0.1 -0.1 +0.7 +0.7 -0.2
stress 1-ethyl-3-methylimidazolium lysine 10 mM +0.3 +0.2 +0.2 +0.2 +0.2
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.0 +0.2 +0.2 +0.5 +0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.6 +0.3 +0.0 +0.2 +0.0
stress Cholin acetate 40 mM -0.0 +0.0 +1.2 +0.8 +0.2
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