Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_13710 and AO356_13715 are separated by 885 nucleotidesAO356_13715 and AO356_13720 are separated by 334 nucleotidesAO356_13720 and AO356_13725 are separated by 321 nucleotidesAO356_13725 and AO356_13730 are separated by 42 nucleotides AO356_13710: AO356_13710 - fructose-bisphosphate aldolase, at 3,109,077 to 3,109,361 _13710 AO356_13715: AO356_13715 - alginate lyase, at 3,110,247 to 3,110,915 _13715 AO356_13720: AO356_13720 - alginate lyase, at 3,111,250 to 3,111,918 _13720 AO356_13725: AO356_13725 - diguanylate cyclase, at 3,112,240 to 3,114,363 _13725 AO356_13730: AO356_13730 - metal-dependent hydrolase, at 3,114,406 to 3,114,909 _13730
Group Condition AO356_13710 AO356_13715 AO356_13720 AO356_13725 AO356_13730
stress methylglyoxal 0.016 vol% -1.0 -0.2 -0.1 +0.0 +0.1
carbon source Carbon source D-Mannitol 5 mM -0.9 -0.1 -0.1 -0.1 +0.1
stress perchlorate 75 mM -0.6 -0.1 -0.2 -0.1 -0.0
stress Fusidic 0.1 mg/ml -0.9 +0.0 -0.1 +0.1 -0.0
stress Rifampicin 0.0016 mg/ml -0.9 -0.0 -0.0 +0.1 +0.1
stress Chloramphenicol 0.005 mg/ml -0.8 -0.0 -0.1 +0.1 +0.1
stress Sisomicin 0.001 mg/ml -0.2 -0.1 +0.3 -0.2 -0.5
stress KB-half, Pseudo5 supernatant +0.4 -0.2 -0.3 -0.3 -0.2
stress Cholin acetate 40 mM -0.7 -0.0 +0.4 -0.1 -0.0
motility outer cut, LB soft agar motility assay -0.3 +0.0 -0.5 +0.1 +0.3
carbon source Carbon source Sucrose 5 mM -0.7 +0.0 +0.1 +0.1 +0.2
stress Nalidixic 0.004 mg/ml -0.6 +0.0 -0.0 +0.1 +0.3
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.7 +0.1 +0.2 +0.2 +0.0
stress acetate 40 mM -0.6 +0.2 +0.4 +0.0 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.8 -0.0 -0.2 -0.4 -0.2
motility outer cut, LB soft agar motility assay +0.6 +0.1 -0.5 +0.1 +0.1
carbon source Cytidine (C) +0.4 +0.1 +0.0 -0.3 +0.1
stress Cobalt chloride 0.08 mM +0.4 -0.1 -0.2 +0.2 -0.0
stress Doxycycline hyclate 0.0001 mg/ml +0.5 -0.2 -0.1 +0.1 +0.1
motility outer cut, LB soft agar motility assay +0.4 +0.0 -0.2 +0.3 +0.0
pH Minimal media pH6 +0.5 +0.1 +0.2 -0.1 -0.2
carbon source NAG (C) +0.6 +0.2 -0.1 +0.1 -0.2
carbon source L-Proline (C) +0.4 +0.1 +0.0 -0.2 +0.3
carbon source Inosine (C) +0.6 +0.1 +0.1 -0.1 +0.0
carbon source Uridine (C) +0.7 +0.1 -0.0 -0.1 +0.0
carbon source L-Isoleucine (C) +0.7 +0.0 -0.2 +0.1 +0.1
stress Cephalothin 2 mg/ml +0.6 +0.1 +0.2 +0.2 -0.1
anaerobic Nitrate reduction with yeast extract +1.0 -0.0 +0.2 -0.1 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.7 -0.0 -0.1 +0.6 +0.1
nitrogen source Urea (N) +0.8 +0.1 -0.1 +0.4 +0.2
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