Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_13490 and AO356_13495 are separated by 158 nucleotidesAO356_13495 and AO356_13500 are separated by 186 nucleotidesAO356_13500 and AO356_13505 overlap by 8 nucleotidesAO356_13505 and AO356_13510 are separated by 229 nucleotides AO356_13490: AO356_13490 - protein PilI, at 3,055,415 to 3,055,954 _13490 AO356_13495: AO356_13495 - chemotaxis protein, at 3,056,113 to 3,058,176 _13495 AO356_13500: AO356_13500 - histidine kinase, at 3,058,363 to 3,064,299 _13500 AO356_13505: AO356_13505 - chemotaxis protein, at 3,064,292 to 3,064,771 _13505 AO356_13510: AO356_13510 - malonate decarboxylase subunit alpha, at 3,065,001 to 3,066,671 _13510
Group Condition AO356_13490 AO356_13495 AO356_13500 AO356_13505 AO356_13510
pH Minimal media pH6 -0.7 -0.4 -0.6 -2.7 +0.1
stress Sisomicin 0.001 mg/ml -1.1 +0.3 -1.4 -1.3 -0.2
carbon source L-Histidine (C) -1.2 -0.5 -0.6 -1.1 -0.1
carbon source L-Histidine (C) -1.0 -0.5 -0.6 -0.9 -0.1
pH Minimal media pH8 -0.5 -0.4 -0.3 -2.1 +0.0
stress acetate 40 mM -0.7 -0.1 -0.3 -1.5 -0.1
temperature LB 37C -0.8 -0.4 -0.4 -0.7 -0.1
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.3 -0.1 -0.3 -1.5 -0.1
pH Minimal media pH6 -0.5 -0.6 -0.5 -0.4 -0.0
carbon source Carbon source Sucrose 2.5 mM -0.8 -0.0 -0.1 -1.1 -0.0
stress Spectinomycin 0.025 mg/ml -0.4 -0.3 -0.3 -1.0 -0.0
stress Cholin acetate 40 mM -1.0 -0.3 -0.4 -0.3 -0.1
survival 4C survival; 192 hrs -1.0 -0.2 -0.3 -0.3 -0.1
carbon source Tween 20 (C) -0.1 -0.2 -0.2 -1.3 -0.0
stress Cisplatin 0.0032 mg/ml -0.8 +0.0 -0.5 -0.7 +0.1
stress Cholin acetate 20 mM -0.3 -0.4 -0.3 -0.7 +0.0
carbon source L-Lysine (C) -0.5 -0.6 -0.1 -0.4 +0.1
stress Cisplatin 0.0032 mg/ml +0.2 -0.4 -0.3 -1.0 -0.0
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.2 -0.2 -0.3 -0.7 -0.0
carbon source L-Leucine (C) -1.0 +0.0 -0.3 -0.2 +0.0
carbon source L-Asparagine (C) -0.6 -0.3 -0.2 -0.2 +0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.2 -0.4 +0.1 -0.7 -0.2
stress KB-half, Pseudo5 supernatant -0.7 +0.2 -0.0 -0.6 +0.2
nitrogen source L-Isoleucine (N) +0.2 +0.8 -0.3 -0.4 +0.1
motility outer cut, LB soft agar motility assay +0.6 +0.6 -0.1 +0.3 +0.0
stress Nickel (II) chloride 0.625 mM +0.7 +0.1 +0.1 +0.7 +0.0
stress copper (II) chloride 2.5 mM +0.8 +0.5 +0.3 +0.5 +0.3
stress methylglyoxal 0.016 vol% +0.6 +0.2 +0.8 +1.2 +0.0
motility outer cut, LB soft agar motility assay +1.1 +0.7 +0.4 +1.5 -0.1
motility outer cut, LB soft agar motility assay +1.7 +1.2 +0.9 +1.1 -0.1
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