Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_13420 and AO356_13425 are separated by 35 nucleotidesAO356_13425 and AO356_13430 are separated by 54 nucleotidesAO356_13430 and AO356_13435 are separated by 162 nucleotidesAO356_13435 and AO356_13440 are separated by 249 nucleotides AO356_13420: AO356_13420 - pyrroline-5-carboxylate reductase, at 3,044,133 to 3,044,951 _13420 AO356_13425: AO356_13425 - hypothetical protein, at 3,044,987 to 3,045,673 _13425 AO356_13430: AO356_13430 - twitching motility protein PilT, at 3,045,728 to 3,046,762 _13430 AO356_13435: AO356_13435 - peptidase P60, at 3,046,925 to 3,047,536 _13435 AO356_13440: AO356_13440 - hypothetical protein, at 3,047,786 to 3,048,214 _13440
Group Condition AO356_13420 AO356_13425 AO356_13430 AO356_13435 AO356_13440
nitrogen source D-Serine (N) N.D. -2.4 +0.2 -0.3 -0.0
stress KB-half, Pseudo5 supernatant N.D. -1.5 -0.2 -0.5 -0.1
carbon source L-Lysine (C) N.D. -1.3 -0.5 -0.3 +0.0
carbon source D-Lactate (C) N.D. -1.8 +0.1 +0.0 -0.1
carbon source acetate (C) N.D. -1.7 +0.2 +0.2 -0.4
carbon source Cytidine (C) N.D. -1.2 +0.0 -0.1 -0.1
survival 4C survival; 1152 hrs N.D. -0.5 -0.1 -0.4 -0.2
stress nitrite 10 mM N.D. -1.4 +0.4 -0.1 -0.0
carbon source Glycerol (C) N.D. -1.1 +0.0 -0.1 -0.0
lb LB N.D. -1.0 +0.1 -0.1 -0.1
stress Spectinomycin 0.0125 mg/ml N.D. -0.7 -0.1 -0.2 -0.1
nitrogen source Adenosine (N) N.D. -1.0 +0.0 -0.0 -0.1
carbon source L-Malic (C) N.D. -1.2 +0.0 -0.0 +0.2
nitrogen source D-Glucosamine Hydrochloride (N) N.D. -1.2 +0.1 +0.1 -0.1
carbon source D-Ribose (C) N.D. -1.1 +0.0 +0.1 -0.1
stress Chlorite 0.08 mM N.D. -0.8 +0.0 -0.2 -0.1
carbon source Carnitine Hydrochloride (C) N.D. -1.1 +0.1 +0.1 -0.0
anaerobic Nitrate reduction with yeast extract N.D. -1.2 -0.1 +0.4 -0.1
stress perchlorate 75 mM N.D. -0.4 -0.4 +0.3 -0.2
stress Spectinomycin 0.025 mg/ml N.D. -0.8 -0.1 +0.0 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. +0.8 -0.4 -0.6 -0.3
carbon source succinate (C) N.D. -0.5 +0.3 +0.1 -0.2
stress nitrate 200 mM N.D. -0.3 +0.1 -0.2 +0.4
stress Benzalkonium Chloride 0.016 mg/ml N.D. +0.6 -0.2 -0.2 +0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. +0.8 -0.3 -0.1 +0.1
stress Nickel (II) chloride 0.625 mM N.D. +0.8 +0.2 -0.1 -0.2
stress Choline chloride 500 mM N.D. +1.0 +0.1 +0.3 -0.1
stress Nalidixic 0.004 mg/ml N.D. +1.6 -0.0 -0.1 -0.0
carbon source Putrescine (C) N.D. +1.0 +0.1 +0.3 +0.0
stress Lomefloxacin 0.0005 mM N.D. +2.2 +0.3 +0.5 +0.0
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