Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_13320 and AO356_13325 overlap by 1 nucleotidesAO356_13325 and AO356_13330 overlap by 8 nucleotidesAO356_13330 and AO356_13340 are separated by 343 nucleotidesAO356_13340 and AO356_13345 overlap by 4 nucleotides AO356_13320: AO356_13320 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 3,027,689 to 3,028,300 _13320 AO356_13325: AO356_13325 - peptidase M16, at 3,028,300 to 3,029,790 _13325 AO356_13330: AO356_13330 - peptidase M16, at 3,029,783 to 3,031,138 _13330 AO356_13340: AO356_13340 - signal recognition particle-docking protein FtsY, at 3,031,482 to 3,032,915 _13340 AO356_13345: AO356_13345 - cell division ATP-binding protein FtsE, at 3,032,912 to 3,033,583 _13345
Group Condition AO356_13320 AO356_13325 AO356_13330 AO356_13340 AO356_13345
stress Bacitracin 2 mg/ml -0.6 +0.4 +0.6 N.D. -7.3
motility outer cut, LB soft agar motility assay -2.3 -0.6 -0.2 N.D. -2.9
stress nitrate 200 mM -2.2 -0.2 -0.6 N.D. -2.7
stress Sisomicin 0.001 mg/ml -1.3 -0.2 -0.1 N.D. -3.3
anaerobic Nitrate reduction with yeast extract -2.0 -0.4 -0.5 N.D. -1.8
pH Minimal media pH9 -1.3 -0.6 -0.2 N.D. -2.8
survival 4C survival; 192 hrs -1.2 -0.6 -0.5 N.D. -2.1
motility outer cut, LB soft agar motility assay -2.5 -0.2 -0.2 N.D. -1.5
carbon source L-Histidine (C) -2.3 -0.6 -0.6 N.D. -0.5
carbon source L-Histidine (C) -1.9 -0.6 -0.7 N.D. -0.4
motility outer cut, LB soft agar motility assay -1.8 -0.6 -0.6 N.D. -0.6
motility outer cut, LB soft agar motility assay -1.5 -0.4 -0.5 N.D. -1.0
survival 4C survival; 1152 hrs -1.4 -0.3 -0.0 N.D. -1.5
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.5 -0.2 -0.1 N.D. -2.3
stress Choline chloride 500 mM -0.6 -0.5 -0.7 N.D. -1.1
stress Chlorite 0.08 mM -2.0 -0.3 -0.3 N.D. -0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.9 -0.3 -0.5 N.D. -1.0
stress Cobalt chloride 0.08 mM -1.3 +0.0 -0.1 N.D. -1.3
stress Benzethonium chloride 0.025 mM +0.1 +0.4 +0.4 N.D. -3.3
stress Lomefloxacin 0.0005 mM -1.3 -0.6 -0.7 N.D. +0.2
stress Benzalkonium Chloride 0.008 mg/ml +0.4 +0.3 +0.6 N.D. -3.6
stress Cholin acetate 40 mM -0.5 +0.3 +0.3 N.D. -2.1
stress Rifampicin 0.0016 mg/ml +0.1 +0.2 +0.4 N.D. -2.6
stress Rifampicin 0.0024 mg/ml +0.9 +0.6 +1.3 N.D. -3.5
stress Benzalkonium Chloride 0.016 mg/ml +1.4 +1.3 +1.5 N.D. -4.7
carbon source Ethanol (C) +1.3 -0.6 -0.6 N.D. -0.2
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.3 +0.6 +0.7 N.D. -1.2
stress Paraquat dichloride 0.0625 mg/ml +0.5 +0.5 +0.7 N.D. -1.3
stress Paraquat dichloride 0.0625 mg/ml +0.9 +0.5 +0.6 N.D. -1.4
stress methylglyoxal 0.016 vol% +1.0 +0.3 +0.4 N.D. -1.0
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