Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_13135 and AO356_13140 are separated by 278 nucleotidesAO356_13140 and AO356_13145 are separated by 40 nucleotidesAO356_13145 and AO356_13150 are separated by 58 nucleotidesAO356_13150 and AO356_13155 are separated by 181 nucleotides AO356_13135: AO356_13135 - Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data), at 2,986,014 to 2,987,390 _13135 AO356_13140: AO356_13140 - Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data), at 2,987,669 to 2,988,445 _13140 AO356_13145: AO356_13145 - glutamine synthetase, at 2,988,486 to 2,989,844 _13145 AO356_13150: AO356_13150 - Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data), at 2,989,903 to 2,991,267 _13150 AO356_13155: AO356_13155 - spermidine/putrescine ABC transporter substrate-binding protein, at 2,991,449 to 2,992,546 _13155
Group Condition AO356_13135 AO356_13140 AO356_13145 AO356_13150 AO356_13155
carbon source Putrescine (C) -6.0 -2.0 -4.3 -4.4 -5.0
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -3.4 -1.6 -3.5 -3.1 -3.6
nitrogen source Putrescine (N) -5.5 +0.4 -3.1 -3.2 -3.9
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -4.1 -1.6 -3.2 -2.9 -3.3
resistance 20 mM putrescine -3.4 -1.9 -3.3 -2.8 -3.6
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -3.5 -1.5 -3.4 -2.8 -3.2
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -2.5 -1.4 -3.6 -3.0 -3.1
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -2.8 -1.4 -3.3 -2.8 -3.3
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -2.3 -0.9 -3.6 -2.4 -3.1
nitrogen source D-Serine (N) -0.2 +0.2 -0.8 -0.5 -0.5
stress Cholin acetate 40 mM -0.3 +0.2 -1.6 -0.1 -0.0
carbon source acetate (C) +0.6 -0.5 -0.4 -0.2 -1.2
anaerobic Nitrate reduction with yeast extract -0.2 -0.2 -0.7 -0.3 -0.2
carbon source acetate (C) +0.6 -0.5 -0.4 -0.1 -0.9
motility outer cut, LB soft agar motility assay -0.2 +0.1 -1.0 -0.2 +0.1
survival 4C survival; 360 hrs +0.6 -0.3 -0.8 -0.6 +0.1
motility outer cut, LB soft agar motility assay -0.1 -0.2 -0.8 -0.2 +0.3
motility outer cut, LB soft agar motility assay -0.4 +0.1 -0.8 -0.3 +0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.4 -0.1 -0.7 -0.2 -0.2
carbon source D-Xylose (C) +0.2 -0.2 +0.4 -0.0 -0.9
carbon source L-Histidine (C) -0.2 -0.1 +0.6 -0.0 +0.7
carbon source L-Histidine (C) -0.2 -0.3 +0.9 -0.0 +0.7
stress Sisomicin 0.001 mg/ml +0.2 +0.2 +0.8 -0.1 -0.1
stress Paraquat dichloride 0.0625 mg/ml -0.1 +1.0 +0.3 +0.3 -0.3
carbon source D-Alanine (C) -0.2 +0.2 +0.5 +0.2 +0.5
stress Lomefloxacin 0.0005 mM +0.6 +0.2 +0.6 +0.2 -0.3
stress Benzalkonium Chloride 0.016 mg/ml -0.0 +0.1 +1.1 +0.3 -0.0
carbon source Fumarate (C) +0.4 +0.2 +1.0 +0.0 -0.2
carbon source L-Lysine (C) +0.4 +1.6 +0.8 +0.8 -1.6
carbon source L-Lysine (C) +0.3 +1.9 +0.8 +0.9 -1.9
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