Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_12935 and AO356_12940 are separated by 124 nucleotidesAO356_12940 and AO356_12945 overlap by 1 nucleotidesAO356_12945 and AO356_12950 are separated by 323 nucleotidesAO356_12950 and AO356_12955 overlap by 25 nucleotides AO356_12935: AO356_12935 - transcription termination factor Rho, at 2,943,675 to 2,944,934 _12935 AO356_12940: AO356_12940 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, at 2,945,059 to 2,946,525 _12940 AO356_12945: AO356_12945 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 2,946,525 to 2,947,493 _12945 AO356_12950: AO356_12950 - calcium transporter ChaC, at 2,947,817 to 2,948,485 _12950 AO356_12955: AO356_12955 - glycerol-3-phosphate transporter, at 2,948,461 to 2,949,810 _12955
Group Condition AO356_12935 AO356_12940 AO356_12945 AO356_12950 AO356_12955
carbon source L-Proline (C) N.D. N.D. -4.7 -0.2 +0.0
carbon source L-Proline (C) N.D. N.D. -3.4 -0.2 +0.1
motility outer cut, LB soft agar motility assay N.D. N.D. -2.3 +0.2 +0.1
motility outer cut, LB soft agar motility assay N.D. N.D. -2.3 +0.2 +0.2
motility outer cut, LB soft agar motility assay N.D. N.D. -2.2 +0.2 +0.2
carbon source acetate (C) N.D. N.D. -1.6 -0.2 +0.0
stress Chlorite 0.08 mM N.D. N.D. -1.3 -0.2 -0.2
carbon source D-Lactate (C) N.D. N.D. -1.6 -0.1 +0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. N.D. -1.6 +0.3 -0.3
motility outer cut, LB soft agar motility assay N.D. N.D. -1.6 +0.0 +0.1
stress Chlorite 0.04 mM N.D. N.D. -0.7 -0.3 -0.4
carbon source D-Lactate (C) N.D. N.D. -1.5 +0.0 +0.0
temperature LB 10C N.D. N.D. -1.5 +0.2 +0.0
stress Nickel (II) chloride 0.625 mM N.D. N.D. -1.2 -0.1 -0.0
stress Cholin acetate 40 mM N.D. N.D. -0.9 -0.2 +0.1
stress methylglyoxal 0.016 vol% N.D. N.D. +0.7 -0.9 +0.1
nitrogen source L-Isoleucine (N) N.D. N.D. +0.9 -0.2 -0.1
carbon source L-Isoleucine (C) N.D. N.D. +1.4 -0.2 -0.1
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine N.D. N.D. +1.2 +0.1 -0.1
carbon source L-Lysine (C) N.D. N.D. +1.2 +0.2 +0.0
carbon source L-Lysine (C) N.D. N.D. +1.0 +0.2 +0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine N.D. N.D. +1.6 -0.1 -0.1
stress Lomefloxacin 0.0005 mM N.D. N.D. +1.2 +0.5 -0.0
stress Bacitracin 2 mg/ml N.D. N.D. +1.0 +0.2 +0.3
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine N.D. N.D. +2.1 -0.0 -0.2
stress Sisomicin 0.001 mg/ml N.D. N.D. +2.5 -0.5 +0.1
stress Aluminum chloride 5 mM N.D. N.D. +0.7 +0.2 +1.5
stress Rifampicin 0.0024 mg/ml N.D. N.D. +2.2 +0.0 +0.1
stress Benzalkonium Chloride 0.016 mg/ml N.D. N.D. +2.0 +0.1 +0.9
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. N.D. -0.0 +0.3 +4.7
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