Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_12890 and AO356_12895 are separated by 17 nucleotidesAO356_12895 and AO356_12900 are separated by 78 nucleotidesAO356_12900 and AO356_12905 are separated by 199 nucleotidesAO356_12905 and AO356_12910 overlap by 14 nucleotides AO356_12890: AO356_12890 - delta-aminolevulinic acid dehydratase, at 2,934,145 to 2,935,158 _12890 AO356_12895: AO356_12895 - polyphosphate kinase, at 2,935,176 to 2,937,392 _12895 AO356_12900: AO356_12900 - exopolyphosphatase, at 2,937,471 to 2,938,973 _12900 AO356_12905: AO356_12905 - amino acid ABC transporter ATP-binding protein, at 2,939,173 to 2,939,910 _12905 AO356_12910: AO356_12910 - amino acid ABC transporter permease, at 2,939,897 to 2,940,547 _12910
Group Condition AO356_12890 AO356_12895 AO356_12900 AO356_12905 AO356_12910
carbon source L-Isoleucine (C) -0.4 -4.2 -0.8 -0.3 -0.1
carbon source L-Lysine (C) -0.5 -3.5 -0.1 -0.5 -0.4
carbon source NAG (C) -0.1 -5.2 +0.4 +0.0 -0.0
pH Minimal media pH9 -0.0 -4.3 -1.1 +0.5 +0.0
carbon source L-Leucine (C) -0.2 -3.8 -0.3 +0.3 -0.1
carbon source acetate (C) -0.3 -3.0 -0.6 +0.1 -0.1
carbon source D-Lactate (C) -0.7 -3.4 -0.1 +0.2 -0.0
carbon source L-Histidine (C) -0.0 -2.9 -0.5 -0.1 -0.2
nitrogen source L-Isoleucine (N) -0.1 -2.8 -0.7 -0.2 +0.2
carbon source D-Lactate (C) -0.4 -2.9 -0.6 +0.3 +0.1
carbon source L-Alanine (C) -0.3 -3.2 -0.6 +0.5 +0.1
carbon source Tween 20 (C) -0.0 -2.1 -1.5 +0.1 -0.0
carbon source L-Lysine (C) -0.4 -3.4 +0.3 +0.1 +0.1
nitrogen source L-Leucine (N) +0.0 -1.9 -1.2 -0.1 -0.0
carbon source D-Alanine (C) -0.3 -3.3 +0.1 +0.3 +0.1
carbon source L-Histidine (C) +0.0 -2.7 -0.5 +0.2 +0.0
carbon source L-Asparagine (C) -0.4 -2.8 +0.3 -0.2 +0.2
carbon source L-Asparagine (C) -0.5 -2.8 +0.7 +0.3 -0.1
motility outer cut, LB soft agar motility assay +0.2 +0.6 -2.5 -0.4 +0.1
carbon source L-Glutamine (C) -0.3 -2.3 +0.3 +0.5 +0.1
carbon source Glycerol (C) -0.1 +1.0 -1.9 -0.3 +0.0
pH Minimal media pH7 +0.3 +0.7 -2.4 +0.1 +0.1
pH Minimal media pH7 +0.2 +0.6 -2.1 +0.5 -0.3
stress Choline chloride 500 mM -0.3 -1.3 +1.0 +0.5 -0.3
stress methylglyoxal 0.016 vol% -0.4 -1.3 +0.7 +0.8 -0.1
survival 4C survival; 192 hrs +0.4 +1.7 -1.9 -0.2 +0.1
stress Lomefloxacin 0.0005 mM -0.1 -1.4 +1.1 +0.9 +0.0
carbon source D-Gluconic Acid (C) +0.5 +2.5 -1.5 +0.2 -0.0
carbon source D-Gluconic Acid (C) +0.6 +2.6 -1.2 -0.1 +0.1
carbon source Fumarate (C) +0.2 +2.0 -0.3 +0.6 +0.2
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