Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_12875 and AO356_12880 are separated by 123 nucleotidesAO356_12880 and AO356_12885 overlap by 20 nucleotidesAO356_12885 and AO356_12890 are separated by 204 nucleotidesAO356_12890 and AO356_12895 are separated by 17 nucleotides AO356_12875: AO356_12875 - isoprenoid biosynthesis protein, at 2,931,309 to 2,931,977 _12875 AO356_12880: AO356_12880 - hypothetical protein, at 2,932,101 to 2,933,336 _12880 AO356_12885: AO356_12885 - hypothetical protein, at 2,933,317 to 2,933,940 _12885 AO356_12890: AO356_12890 - delta-aminolevulinic acid dehydratase, at 2,934,145 to 2,935,158 _12890 AO356_12895: AO356_12895 - polyphosphate kinase, at 2,935,176 to 2,937,392 _12895
Group Condition AO356_12875 AO356_12880 AO356_12885 AO356_12890 AO356_12895
carbon source L-Asparagine (C) -0.1 -0.1 -2.0 -0.5 -2.8
carbon source NAG (C) -0.1 -0.0 +0.3 -0.1 -5.2
carbon source D-Lactate (C) +0.2 -0.1 -1.0 -0.7 -3.4
carbon source L-Asparagine (C) +0.1 -0.1 -1.7 -0.4 -2.8
carbon source L-Leucine (C) -0.1 -0.1 -0.4 -0.2 -3.8
carbon source L-Lysine (C) +0.1 -0.2 -0.4 -0.4 -3.4
carbon source L-Lysine (C) -0.0 -0.1 -0.1 -0.5 -3.5
carbon source L-Alanine (C) -0.1 +0.1 -0.6 -0.3 -3.2
carbon source D-Alanine (C) -0.1 -0.0 -0.4 -0.3 -3.3
carbon source L-Isoleucine (C) -0.2 -0.0 +0.6 -0.4 -4.2
stress Cholin acetate 40 mM -0.1 -0.4 -1.7 -0.2 -1.6
pH Minimal media pH9 -0.1 +0.1 +0.3 -0.0 -4.3
carbon source D-Lactate (C) +0.1 -0.0 -0.6 -0.4 -2.9
carbon source L-Histidine (C) -0.1 -0.1 -0.6 -0.0 -2.9
carbon source acetate (C) -0.1 -0.0 -0.1 -0.3 -3.0
carbon source L-Glutamine (C) -0.1 +0.1 -0.7 -0.3 -2.3
carbon source L-Arginine (C) -0.1 +0.0 -0.2 -0.1 -2.8
carbon source L-Glutamine (C) +0.0 +0.0 -0.7 -0.3 -2.3
nitrogen source L-Isoleucine (N) -0.1 -0.0 +0.2 -0.1 -2.8
carbon source Cytidine (C) -0.2 +0.1 +0.3 -0.3 -2.3
motility outer cut, LB soft agar motility assay -0.1 -0.1 -2.8 +0.2 +0.6
motility outer cut, LB soft agar motility assay +0.2 -0.1 -2.2 -0.2 +0.4
motility outer cut, LB soft agar motility assay -0.3 +0.0 -2.0 -0.5 +0.8
carbon source D-Xylose (C) -0.2 -0.1 +1.0 -0.1 -2.4
carbon source D-Xylose (C) -0.2 -0.1 +0.9 +0.1 -2.3
stress Lomefloxacin 0.0005 mM -0.1 +0.1 +1.7 -0.1 -1.4
survival 4C survival; 192 hrs +0.3 +0.1 -1.0 +0.4 +1.7
carbon source D-Gluconic Acid (C) -0.1 +0.0 -0.2 +0.5 +2.5
carbon source D-Gluconic Acid (C) +0.1 +0.0 -0.3 +0.6 +2.6
stress Sisomicin 0.001 mg/ml -0.1 +0.4 +1.6 +1.1 +1.0
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