Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_12840 and AO356_12845 are separated by 84 nucleotidesAO356_12845 and AO356_12850 are separated by 3 nucleotidesAO356_12850 and AO356_12855 are separated by 154 nucleotidesAO356_12855 and AO356_12860 are separated by 18 nucleotides AO356_12840: AO356_12840 - threonine transporter RhtB, at 2,924,414 to 2,925,046 _12840 AO356_12845: AO356_12845 - penicillin-binding protein activator LpoB, at 2,925,131 to 2,925,874 _12845 AO356_12850: AO356_12850 - penicillin-binding protein activator LpoB, at 2,925,878 to 2,926,465 _12850 AO356_12855: AO356_12855 - hypothetical protein, at 2,926,620 to 2,926,991 _12855 AO356_12860: AO356_12860 - hypothetical protein, at 2,927,010 to 2,928,404 _12860
Group Condition AO356_12840 AO356_12845 AO356_12850 AO356_12855 AO356_12860
carbon source D-Trehalose (C) -1.0 -0.1 -0.1 -0.1 -0.1
carbon source D-Trehalose (C) -1.0 +0.1 -0.1 -0.0 -0.2
nitrogen source Gly-Glu (N) -1.0 -0.0 +0.0 -0.0 +0.0
anaerobic Nitrate reduction with yeast extract -0.8 +0.2 -0.0 -0.1 -0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -1.0 +0.1 +0.1 +0.1 +0.0
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.8 -0.0 +0.2 +0.1 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.2 -0.3 -0.3 +0.1 +0.1
stress methylglyoxal 0.016 vol% -0.3 +0.1 +0.0 -0.2 -0.1
stress copper (II) chloride 2.5 mM -0.1 +0.1 -0.2 -0.5 +0.2
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.5 -0.1 +0.1 +0.1 -0.1
stress perchlorate 75 mM -0.2 -0.1 -0.1 -0.3 +0.2
motility outer cut, LB soft agar motility assay -0.0 -0.2 +0.2 -0.4 -0.0
motility outer cut, LB soft agar motility assay -0.5 -0.1 -0.0 +0.4 -0.1
stress sodium fluoride 6.25 mM +0.1 -0.0 -0.1 -0.4 +0.1
carbon source Carbon source D,L-Lactate 10 mM -0.2 -0.2 +0.2 -0.1 +0.0
carbon source Carbon source D-Mannitol 5 mM -0.3 -0.1 -0.1 +0.2 +0.1
stress Nalidixic 0.004 mg/ml -0.3 -0.0 +0.1 -0.1 +0.1
pH Minimal media pH9 +0.2 -0.2 -0.2 +0.2 -0.1
stress nitrite 10 mM -0.3 +0.3 +0.1 -0.5 +0.1
stress Lomefloxacin 0.0005 mM -0.1 +0.2 +0.0 -0.3 +0.1
nitrogen source Urea (N) -0.3 +0.2 +0.1 +0.1 -0.2
stress Chlorite 0.08 mM -0.2 -0.2 +0.1 +0.1 +0.2
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.3 +0.2 +0.1 +0.1 -0.1
survival 4C survival; 672 hrs -0.2 +0.1 +0.3 -0.2 -0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.0 +0.0 +0.1 -0.4 +0.2
stress Cisplatin 0.0032 mg/ml +0.0 +0.1 -0.2 -0.1 +0.3
stress Fusidic 0.1 mg/ml -0.1 +0.2 +0.3 +0.0 +0.1
nitrogen source L-tyrosine (N) +0.2 +0.2 +0.2 +0.0 +0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.4 -0.0 +0.2 +0.2 +0.1
stress Doxycycline hyclate 0.0001 mg/ml -0.0 +0.1 +0.4 +0.1 +0.3
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