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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2C3
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500 nt
AO356_12510 and AO356_12515 are separated by 95 nucleotides
AO356_12515 and AO356_12520 are separated by 82 nucleotides
AO356_12520 and AO356_12525 are separated by 172 nucleotides
AO356_12525 and AO356_12530 are separated by 27 nucleotides
AO356_12510: AO356_12510 - sodium:glutamate symporter, at 2,854,708 to 2,855,916
_12510
AO356_12515: AO356_12515 - exodeoxyribonuclease III, at 2,856,012 to 2,856,791
_12515
AO356_12520: AO356_12520 - orotate phosphoribosyltransferase, at 2,856,874 to 2,857,518
_12520
AO356_12525: AO356_12525 - acetylglutamate kinase, at 2,857,691 to 2,858,596
_12525
AO356_12530: AO356_12530 - phosphoglucomutase, at 2,858,624 to 2,860,021
_12530
Group
Condition
AO356
_12510
AO356
_12515
AO356
_12520
AO356
_12525
AO356
_12530
carbon source
D-Glucosamine Hydrochloride (C)
+0.0
-3.4
-4.5
-5.6
-0.6
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.0
-1.2
-5.0
-5.4
-0.2
carbon source
D-Sorbitol (C)
+0.1
-1.0
-4.4
-5.4
-0.2
carbon source
D-Mannose (C)
-0.1
-1.0
-4.3
-5.2
-0.1
carbon source
L-Glutamic (C)
+0.0
-1.0
-4.3
-5.5
+0.1
nitrogen source
nitrite (N)
-0.1
-0.5
-5.1
-4.9
+0.0
nitrogen source
Carnitine Hydrochloride (N)
+0.1
-1.4
-4.5
-5.0
+0.1
carbon source
L-Proline (C)
+0.2
-1.4
-4.4
-5.0
+0.0
carbon source
Tween 20 (C)
+0.1
-0.8
-4.4
-5.4
-0.0
carbon source
Tween 20 (C)
+0.2
-0.9
-4.5
-5.3
-0.0
nitrogen source
Thymine (N)
-0.0
-0.1
-5.1
-5.4
+0.2
nitrogen source
Ammonium chloride (N)
+0.1
-0.6
-5.0
-4.9
+0.0
nitrogen source
Adenine (N)
-0.3
+0.3
-5.1
-5.1
+0.0
carbon source
D-Trehalose (C)
+0.2
+0.4
-4.5
-6.1
-0.0
carbon source
NAG (C)
-0.0
+0.9
-4.4
-4.8
-1.1
carbon source
L-Asparagine (C)
-0.0
+0.6
-4.6
-5.4
+0.1
pH
Minimal media pH8
-0.1
+0.7
-5.1
-4.9
+0.0
carbon source
Glycerol (C)
+0.3
+0.8
-4.2
-5.7
+0.1
carbon source
Glycerol (C)
+0.1
+0.9
-4.3
-5.4
+0.0
carbon source
L-Alanine (C)
+0.2
+1.1
-4.4
-5.1
+0.0
carbon source
Putrescine (C)
+0.0
+0.8
-4.3
-4.8
+0.8
carbon source
L-Isoleucine (C)
-0.1
+2.5
-4.3
-5.3
-0.0
carbon source
L-Leucine (C)
+0.1
+1.9
-4.3
-5.0
-0.0
carbon source
D-Alanine (C)
+0.1
+2.3
-4.4
-5.1
+0.0
carbon source
L-Histidine (C)
+0.0
+2.6
-4.3
-4.8
+0.1
carbon source
L-Histidine (C)
+0.1
+2.5
-3.5
-5.2
+0.1
nitrogen source
L-Isoleucine (N)
+0.3
+3.0
-4.3
-4.6
-0.1
carbon source
D-Fructose (C)
+0.1
+2.7
-3.6
-4.2
-0.7
nitrogen source
L-Leucine (N)
+0.2
+5.5
-4.4
-5.2
-0.3
nitrogen source
L-tyrosine (N)
+0.4
+7.8
-3.9
-4.9
+0.3
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